KEGG   Alligator mississippiensis (American alligator): 102563699
Entry
102563699         CDS       T03087                                 
Symbol
CACNA1S
Name
(RefSeq) calcium voltage-gated channel subunit alpha1 S
  KO
K04857  voltage-dependent calcium channel L type alpha-1S
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04010  MAPK signaling pathway
amj04020  Calcium signaling pathway
amj04260  Cardiac muscle contraction
amj04261  Adrenergic signaling in cardiomyocytes
amj04270  Vascular smooth muscle contraction
amj04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:amj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102563699 (CACNA1S)
   04020 Calcium signaling pathway
    102563699 (CACNA1S)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    102563699 (CACNA1S)
  09153 Circulatory system
   04260 Cardiac muscle contraction
    102563699 (CACNA1S)
   04261 Adrenergic signaling in cardiomyocytes
    102563699 (CACNA1S)
   04270 Vascular smooth muscle contraction
    102563699 (CACNA1S)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:amj04040]
    102563699 (CACNA1S)
Ion channels [BR:amj04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   102563699 (CACNA1S)
SSDB
Motif
Pfam: Ion_trans GPHH Ca_chan_IQ PKD_channel CAC1F_C Pedibin DUF2670
Other DBs
NCBI-GeneID: 102563699
NCBI-ProteinID: XP_014464919
Position
Un
AA seq 1862 aa
MEPASVQEDQKKKQQKEKSKKPVPPAVPRPARALFCLTLQNPLRKACISIVEWKPFEIII
LLTIFANCVALAVYLPMAEDDTNATNSRLEKIEYVFLFIFTIEAMLKIIAYGFLFHADAY
LRNGWNVLDFAIISLGLFTMMLEQISVMQGAPPSGKGGFDVKALRAFRVLRPLRLVSGVP
SLQVVLNSIIKAMVPLLHIALLVLFMIIIYAIVGQELFKGKMHKTCYYTGTDIIATVGSE
KPAPCTSTGHGRHCTLNGTDCRGGWPGPNNGITHFDNFGFAMLTVYQCITMEGWTEVLYW
VNDAIGNEWPWIYFVSLILLGSFFILNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLE
EDLKGYIDWITHAEVVDSVRTRGEGMLPLDEGGSETESLYEIEGMNKWILFFRHWRRWNR
LFRRKCREVVKSKFFYWLVILLITLNTLSIASEHHMQPDWLTHVQDNANWVLLSLFAAEM
LLKMYALGLRQYFMSLFNRFDCFVVCAGIVETILVEFSIMSPLGISVLRCIRLLRIFKIT
KYWTSLSNLVASLLNSIRSIASLLLLLFLFIVIFSLLGMQLFGGKYDFEDMEVRRSTFDN
FPQALISVFQVLTGEDWNSIMYNGIMAYGGPSFPGMLVCIYFIILFVCGNYILLNVFLAI
AVDNLAEAESLTSAQKAKAEERKRRKMSRGYPGKSEEEKQLLAKKLEQKAKGEGIPTTAK
LKVDEFESNVNEIKDPYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPMPEASAF
FIFSPTNKIRILCHRIVNATWFTNFILLFILLSSISLAAEDPIRAESFRNQILGYFDIGF
TSVFTVEIVLKMTAYGAFLHKGSFCRNSFNILDLLVVAVSLISMGIQSSTISVVKILRVL
RVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVIVTTLLQFMFACIGVQLFKGKFNSCTD
PSKITEKECRGSFITYVDGDPTQIQLEQREWQHNDFHFDNVLSAMMSLFTVSTFEGWPQL
LYKAIDTHTEDMGPIYNYRVEMAIFFIIYIILIAFFMMNIFVGFVIVTFQEQGESEYKNC
ELDKNQRQCVQYALKARPLRRYIPKNPYQYQIWYVVTSSYFEYLMFFLILLNTICLGMQH
YNQSDEMNHASDILNVTFTILFTVEMFVKLMAFKAKGYFGDPWNVFDFLIVIGSIIDVIL
SEIDTVLASSGGLYCLSGGCNSIDSEDNSRVSITFFRLFRVLRLVKLLSRGEGVRTLLWT
FIKSFQALPYVALLIVMLFFIYAVIGMQMFGKVAMVDGTQINRNNNFQTFPQAVLLLFRC
ATGEAWQEILLAASYGKLCDPESDYAPGEEYTCGTGFAYFYFISFYMLCAFLIINLFVAV
IMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFC
PHRVACKRLVCMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQANEELRAIIKKIWK
RTSMKLLDQVIPPIGDDEVTVGKFYATFLIQEHFRKFMKHQEEYYGYRPKKNPIEIQAGL
RTIEEEAAPEIHRAISGDLTAEEELERAMVEAAMEEGIYRRQGGLFGQVDNFIEHHSPLQ
PHVASQRPLQFTEQGSEDIDSPVFLDDFTPERNTNASNANNNNAASRVEYEDELQGKKMS
CQTRELSALAPKCTSHQEKLQQELSRRRAASVRVCPVSRLHIVPPQVPREEASTHEQGVE
EGEVQGSAWQVDGDSDLTREEDPAASAPATTLLIQEALISGGLSTLAHDPSFVTVTSNEM
AAAYQMEMEEVEMAAAEVLKGRKSLEGEKTTSPGQPLSSTSLHNSHGCSVVSSQEAISAT
HL
NT seq 5589 nt   +upstreamnt  +downstreamnt
atggagcctgcttctgtccaggaggatcagaagaaaaagcaacagaaggaaaaatcaaag
aaacctgtgccgcctgcagtcccacggccagccagggctctgttctgcttaacccttcaa
aacccacttcgaaaggcgtgcatcagtattgtggaatggaaaccctttgaaatcattatc
ctgctgaccatctttgccaactgtgtggcgctggcagtctacttgcccatggccgaggat
gataccaacgctacaaactcccgcctggagaagatagaatatgtcttcctgttcatcttt
accattgaagccatgcttaagatcattgcttatgggtttttgttccatgcggatgcctac
ctccggaatggctggaacgtgctggacttcgccatcatctccttggggctctttaccatg
atgctggagcagatcagcgtgatgcagggcgcacctccgagtgggaagggcggctttgac
gtcaaggccctgagagccttccgggtgctcagacctctgcgcctggtgtcaggagtgcca
agcctgcaggtggtcctgaactccatcatcaaggccatggtgcccctgttgcacatcgca
ctgctcgttctcttcatgatcatcatatatgccatcgttgggcaggagctgttcaagggc
aagatgcataagacctgctactacactgggactgatatcattgccacagtggggtcggag
aagccagccccatgtaccagtactgggcatgggcgtcattgcaccctcaatggcacggat
tgcagaggcgggtggccagggcccaacaatggcatcacccacttcgataactttgggttc
gccatgctgacagtgtaccagtgcatcaccatggagggatggactgaagtcctctactgg
gtgaatgacgccattggaaacgaatggccctggatctattttgtcagcctcatcctgctg
ggctccttcttcattctcaacctagtgctgggtgttctcagtggcgagtttaccaaggag
cgagaaaaggcgaaatcacggggcacgttccagaagctgcgggagaagcagcagctggag
gaggatcttaagggctacatagactggatcacacatgctgaagttgtggacagtgttcgg
accagaggagaaggaatgctgccattagatgaaggtggctcagagacagagagcctgtat
gaaattgagggcatgaacaagtggattctcttctttcggcactggaggcggtggaaccgc
ctgttccgcaggaagtgccgtgaagtggtgaagtccaagttcttctattggttggtgatc
ctcctcatcaccctcaacaccctgtcaatagcctctgagcaccacatgcagccagactgg
ctgacccacgtgcaagataatgccaactgggtgttgctgtcactatttgcggctgagatg
ttgctgaagatgtatgcgctgggcctgcgccaatacttcatgtccctcttcaaccgcttt
gactgcttcgtggtgtgtgctggcatcgtggaaaccatcctggtggagttcagcatcatg
tcacctctgggcatctctgttttgcggtgcatccgcctgctgaggatcttcaagataacc
aagtactggacttctctgagcaacctggtggcatccctgctgaactcgatccgctccatt
gcttccctcctcctcctcctcttcctcttcattgtcatcttctccctcctggggatgcag
ctctttggagggaagtatgactttgaggacatggaggttcgacgcagcactttcgacaac
ttcccccaggccctcatcagtgtcttccaggtcctgacaggagaagactggaattccatc
atgtacaatgggatcatggcctatggagggccctccttccctggcatgctggtctgcatt
tacttcatcatcctctttgtctgtgggaactatatcctgctcaatgtcttcctggcgatt
gcggtggacaatctggctgaggctgagagcctgacctctgcccagaaggccaaggcggag
gagaggaagcggaggaaaatgtccagaggttacccagggaaatctgaggaggagaagcaa
ctactggccaagaagctggagcagaaagccaaaggggaaggaatccccaccacagccaag
ctaaaagtagatgagtttgagtcaaacgtcaatgagatcaaagacccttacccctctgct
gacttcccaggcgacgatgaggaagatgaacctgaaatccccctgagccctcggccgcgc
cccctggcagagctgcagctcaaggagaaagctgtgcccatgcccgaagccagtgccttc
tttatcttcagccccaccaacaagatccgaattctgtgccacaggattgtcaacgccacc
tggttcaccaacttcatcctcctcttcattctgctcagcagcatctcactggcggccgag
gatcccattcgggctgagtccttccgaaaccagattcttggatattttgacattggattc
acctctgtgtttactgttgaaatagttttgaagatgaccgcatatggagcattcctccac
aagggatccttctgccggaactccttcaacatcctggatctgctggtggtggctgtctcc
ctcatctccatggggattcagtccagcaccatttctgtggtgaaaattttgagggtactg
agagtcctgcggccactgcgagccattaacagagcaaaggggctgaagcatgtggtccag
tgcgtgttcgtggccatcaaaaccattggcaacattgtgatagtcaccaccttgctgcag
ttcatgtttgcctgcattggggtgcagctcttcaaggggaagtttaacagctgtacagac
ccgtcgaagataaccgagaaagaatgcagagggtctttcatcacgtacgtggacggcgac
cccacgcagattcagctggagcagcgtgagtggcagcacaatgacttccactttgacaat
gtcctctcggccatgatgtccctcttcacagtctcgacatttgagggctggccacagctg
ctgtacaaggccatcgacactcacactgaggacatgggccccatctataactaccgggtg
gagatggccatcttcttcatcatctacatcatccttattgccttcttcatgatgaacatc
tttgtgggctttgttattgtcaccttccaggagcagggtgagagcgagtacaagaactgc
gagctggacaagaaccagcgccagtgtgtgcagtatgcgctgaaagcccggccactgaga
cgctacatccccaagaacccctatcaataccagatctggtacgtggtgacctcctcctac
ttcgagtacctcatgttctttctgatcctactgaataccatctgcctgggcatgcagcat
tacaaccagtctgatgagatgaaccatgcctcagacatcctgaacgtgaccttcaccatc
ctcttcactgtggagatgttcgtcaagctcatggcctttaaagccaagggctattttggc
gacccttggaacgtctttgatttcctcatcgttattggcagcatcattgatgtcatcctg
agtgagatagacactgttcttgcttccagtggcggactgtactgcctaagcggaggctgt
aatagcattgactctgaggacaactcccgtgtttccatcaccttcttccggcttttccga
gtgttgaggttggtgaagctgctgagccgaggggaaggagtcaggacccttctctggacc
tttatcaagtccttccaggccctgccctatgtggcgttgctgatcgtgatgctgtttttc
atctacgctgtgattgggatgcagatgtttgggaaagttgccatggtggatgggacccaa
atcaaccggaacaacaacttccagaccttcccccaagccgtgttgctgctcttcaggtgt
gcaacaggagaggcctggcaagagatcctgctggccgccagctacgggaagctgtgtgac
ccagagtccgactacgccccaggagaagagtacacttgtggcaccggctttgcctacttc
tatttcatcagcttctacatgctgtgtgccttcctgattatcaacctctttgtcgctgtc
atcatggacaactttgactacctcacgcgtgactggtccatcttgggtccacatcacctg
gatgaattcaaaagaatctgggctgaatatgacccagaagccaaggggagaatcaagcac
ctggatgtggtgaccctgctgaggcgcatccagccacccctcggctttgggaagttctgc
ccgcaccgggtggcttgcaagcgcctggtgtgcatgaacatgcctctgaacagcgatggc
accgttaccttcaatgccaccctctttgccctggtgaggacagccctcaagatcaagaca
gaaggtaactttgaacaggccaacgaggagctgagagccattatcaagaagatctggaag
cgaactagtatgaagctcctggaccaggtcattccacctattggagacgatgaggtgaca
gtaggcaagttttatgcaactttcctcatccaggagcacttcaggaagttcatgaagcac
caggaggagtattatggatacaggcccaaaaagaaccccattgaaatccaggctggcctg
aggaccattgaagaagaagctgcccctgagatccaccgagcaatctctggagatctgact
gctgaggaggagctggagagagctatggtggaggcagcgatggaggaagggatatacaga
aggcaagggggcttgtttggtcaggttgacaacttcattgagcaccatagccccctgcag
ccccatgtagccagccaaagacccctgcagttcactgagcagggcagcgaggacatagac
tcccctgtcttcctcgatgacttcaccccagagaggaataccaatgccagcaatgccaac
aacaacaatgcagcatcacgggtggagtatgaggatgagctgcaagggaagaagatgtcc
tgccagacacgagagctatctgcattggcgcccaaatgcacctcccaccaggagaagctg
cagcaggagctgagcaggagacgagcagccagcgtcagggtgtgtccagtgtcacggctg
cacattgtccccccacaggtgcccagagaggaggccagtacccatgaacagggagtggag
gaaggggaagtgcaaggctcagcatggcaagtggatggtgacagtgatctgaccagggag
gaagaccctgctgcctctgcaccagccaccaccttacttatccaggaggctctgatctcc
ggaggcctcagcaccctggcccacgacccatcctttgtgacggtgacaagcaatgagatg
gctgctgcttaccagatggagatggaggaggtggaaatggctgctgctgaggtcctgaag
ggaaggaaaagcctggagggtgagaagactacctctcctggccagcctctctcatccaca
tcactacacaactctcatgggtgcagcgtggtcagctcccaggaggccatttctgccacc
cacctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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