KEGG   Alligator mississippiensis (American alligator): 102563870
Entry
102563870         CDS       T03087                                 
Symbol
PSMB8, TAP1, TAP2
Name
(RefSeq) uncharacterized LOC102563870
Organism
amj  Alligator mississippiensis (American alligator)
SSDB
Motif
Pfam: ABC_membrane ABC_tran Proteasome SMC_N AAA_29 AAA_16 AAA_22 AAA_15 AAA_30 AAA_21 Zeta_toxin RsgA_GTPase SRP54 nSTAND1
Other DBs
NCBI-GeneID: 102563870
NCBI-ProteinID: XP_019354685
Position
Un
AA seq 1499 aa
MAIPYYTGRMTDWIVSEDDPSGFGYAIWIMSLITIFSAVTEFLCDCVYNTTMNRIHTRLQ
GQVFSSVLRQEIAFFHTNRTGDITSRVTADTEAASEALSEKLSLLMWYGARGAFLYILML
RLSLRLAICTAVGLPLILLVPKFSGKLHQSLAQRVQESLARANEVAVETFQAMPTVRSFA
NEEGAARSYAARLQDTYHLNQKEAAAYALSTWTTSLSGLALKVGILYYGGRLVTAGAISS
GDLVTFVLYEMQFTTAVEVLLSVYPSVQKAVGSSEKIFEYMDRMPQITPSGTLEPSSLCG
HVQVCDVWFSYPGRDDAPVLKGITLELRPGEVTALVGPSGAGKSALVGLLERFYEPQRGR
ILLDGRDLRDYEHHYLHRQVALVSQKPVLFARSLHDNIAYGLGPQNRKEVEAAACRANAH
GFIARLNHGYDTDVGEMGSQVSGGQRQGVAIARALIRDPCVLILDDATSSLDTESQLRVE
EEVYEGARAGRSVLLIAHRLSAVERANCILVLEDGIVQEQGTHQELLAQRGAYWRLFQAQ
EQNGNNGANTGCREECGGPEAMALLEVCGVARSSWDWDWAPPGAEAGAGAVPRGPAHYGF
AARRPELALPPGLQPAEFLRGLAGGSRGRADVRIQLLHGTTTLAFKFQHGVVVAVDSRAS
AGNYIDTLEANKVIEINPYLLGTMSGSAADCQHWERLLAKHCRLYALRNKERISVSAASK
LLANMLGEYRGMGLSVGSMICGWDKKGPGLYYVDNNGTRLSGPMFSTGCGNTYAYGVLDS
GYWPDLTVEEAYALARRAIAQATHRDAYSGGVVNMYHMKEDGWIKVERTDVSDLIHKYLE
AKQAWRLLGPGPPRPAPLAALCLGPALYATLRGCVASAPPASLARGPWGWLLLVYGAAGL
AQLTWGALGRGAGAPSAEEMKQRQQSWALLRRLVGLSWPDLPYLAGAFVFLTLAVIGETF
IPYYTGRIIDVLGGHYNPDAFTAAIGLMCLYSFISSLAVGCRGGLFMFTFSRLNIRTRCQ
LFSSLVHQDLAFFQQVKTGDLTSRLSKDASLMSRSVPANANIFLRSLVKALGLYGFMLGL
SWHLTLLTLLEMPFTMAAQKIYDARYQAVLQAIQDSMASSGEVAREAVASVETVRSFGTE
KEEAQRYAAALAHTRRLKDRRDLERALYLLFRRLLQLAMQVLILYCGHQQIQDGLMTKGG
LVSFLLYQGEVGQYVQTLVYIYGDLLSNVGAAEKVFEYLDRVPAVSTDGTWVPTMLQGHI
AFQDVSFAYPSRPDLLVLQGVSFELRPGVVTALVGLNGSGKSTCVALLERFFEPQAGEVL
LDGKPLHTYEHRYLHRQVVLVGQEPVLFSGSVRDNITYGLEGCSEEQVMAAARAAHANEF
IDMLDQGLETDVGEKGGQLSVGQKQRIAIARALIRQPRVLILDEATSALDVESEAVVRAA
VLSGGARTVMVIAHRMATVEGADHIVVLEGGAVTEQGTHAELMAHQGPYYRLVQRQLIE
NT seq 4500 nt   +upstreamnt  +downstreamnt
atggcgatcccatactacacggggcgcatgacagactggattgtgagtgaggatgacccc
tcgggcttcggttatgccatctggatcatgtccctcatcaccatcttcagtgctgtgacg
gagttcctgtgcgactgtgtctacaacaccaccatgaaccgcatccacacacggctccag
ggccaggtgttcagctccgtcctgcgccaggagattgccttcttccacaccaaccgcact
ggcgacatcacgtcacgcgtgacagcggacacagaggcggcgagtgaggcactgagcgag
aagctgagcctgttgatgtggtacggggcacgcggcgccttcctctacatcctgatgctg
cgactgtccctgcgccttgccatctgcaccgctgtgggactgcccctcatcctccttgtg
cccaagttctccggcaagctgcatcagagcctggcgcagcgggtgcaggagtcactggcc
cgggccaatgaggtggcagtggagacatttcaggccatgcccacagtgcgcagctttgcc
aatgaggaaggagcagcgcggagctatgccgcccgactgcaagacacctaccacctgaac
cagaaggaagctgctgcctatgccctctccacctggaccaccagtctctcggggctggct
ctgaaggtgggcatcctgtactacgggggccggctggtgacagctggtgccatcagcagt
ggggacctggtcaccttcgtcctctacgagatgcagttcaccaccgccgtggaggtgctg
ctgtccgtctaccccagtgtgcagaaggccgtgggctcctctgagaagatctttgagtac
atggaccgaatgccccagatcaccccttctgggaccctggagccctccagcctgtgcggg
catgtccaggtgtgcgacgtctggttctcttaccctggacgggacgacgctcctgttctc
aagggcatcacactggagctgcggcctggggaggtgacagcactagtggggccttcaggt
gctgggaagagtgcgctggtgggcctgctggaacggttctatgagccccagcgtggccgc
atcctgctggatgggcgggacctgcgggactatgagcaccactacttgcaccgccaggtg
gcacttgtgagtcagaagccagtgctgtttgcccgctctctgcatgacaacatcgcctat
gggctgggtccccagaaccgtaaggaggtggaggcagctgcctgccgtgccaatgcccat
ggcttcattgcccggctgaaccatggctatgacacagatgtgggcgagatggggagccag
gtctccggggggcagcggcagggagtggccattgcccgagccctgatccgagacccgtgt
gtgcttatcctggatgatgccaccagctccctggacactgagagccagctgcgggtggag
gaggaggtgtacgagggggcgcgggctgggcgctcagtcctgctcatcgcccaccggctc
agtgcagtggagcgggccaactgcatcctggtgctggaggacggcatcgtgcaagaacag
ggtacccaccaggagctgttggcacagcgcggggcatactggcgcctattccaggcccag
gagcagaatgggaacaatggggccaacaccggctgcagggaagagtgtggggggcccgaa
gcgatggcgctgctagaggtgtgcggcgtcgcccgcagctcctgggactgggactgggcg
ccccccggggccgaggcaggagccggagccgtcccgcggggccccgcgcactacggcttc
gcggcgcggcggcccgagctggcgctgcccccggggctgcagccggccgagttcctgcgg
ggcctcgcgggcgggagccggggccgcgccgacgtgcggatccagctgctgcacggcacc
accacgctggccttcaagttccagcacggcgtggtcgtggccgtggactcccgggcctct
gcgggcaattacatcgacaccctggaagccaacaaggtgattgagatcaacccctacctg
ctgggcaccatgtcgggcagtgccgccgactgccagcattgggagcggctccttgccaag
cactgcaggctctacgctcttcgcaacaaagagcggatcagcgtctcggctgcctccaag
ctgctggccaacatgctgggcgagtaccgtggcatggggctgtctgtgggcagcatgatc
tgcggctgggacaagaagggccccgggctgtactatgtggataacaatgggacccgcctc
tctggccccatgttctccactggctgtggaaacacctatgcttatggggtgctggacagc
ggctactggccggacctcactgtggaagaagcctacgccctggctcgccgtgccatcgcc
caggccacacaccgcgatgcctactccgggggtgttgtcaacatgtatcacatgaaggaa
gatggctggatcaaggtggagcggacggatgtcagtgacttaatccacaagtacctggaa
gccaagcaggcctggcgcctgctgggccccgggcccccccgcccggcccccctggccgcc
ctgtgcctgggccccgcgctctacgccacgctgcgggggtgcgtggccagtgccccccct
gcctcgctggcccgtggcccctggggctggctgctgctggtctatggggcagccgggctg
gcccagctcacctggggggcactggggcgaggggctggggcacccagcgcggaggagatg
aagcagagacagcagtcctgggccctgctgcgacggctggtggggctgtcctggcctgac
ctgccctacctggctggagccttcgtcttcctcaccttggctgtcatcggtgagacattc
attccctactacactggccgcatcattgatgtcctcggtgggcactataaccctgatgcc
ttcactgccgccattggcctcatgtgcctgtactccttcatcagctccctggctgtcggc
tgccgtgggggactcttcatgttcaccttctcccgcctcaacatccgcacccggtgccag
ctcttctcttccctggtgcaccaggacctggccttcttccagcaggtcaagacaggcgac
ctgacatcgcgcctctccaaggatgcatccctgatgagccgttcggtgccggccaacgcc
aacatcttcctgcgcagcctggtgaaggcgctggggctctatggcttcatgctgggactg
tcgtggcacctgacgctgcttacgttgctcgagatgcccttcactatggctgcccagaag
atctacgatgcccgctaccaggctgtgctgcaggccatccaggactccatggcctcttct
ggggaggtggcacgcgaggcagtggcctctgtggagactgtgcgcagctttggcactgag
aaggaggaggcacagcgctacgcagcagccctggcccacacccggcgcctcaaggaccgc
cgggacctggagcgggccctctacctgctcttccgaaggctgctgcagctggccatgcag
gtgctgatactgtactgtggccaccagcagatccaggatgggctcatgaccaagggtggt
ctggtctccttcctgctctaccagggtgaagtggggcaatacgtacagaccctggtgtac
atatatggggacctgctgagcaacgtgggagcggcagagaaggtgtttgagtatctggac
cgggtgccagctgtgagcactgacgggacctgggtgcctactatgctgcagggccacatt
gctttccaggatgtctcctttgcctacccctcacgccctgatctcctcgtcctccagggg
gtgtcatttgagctgcggcctggggtggtgacagcactggtggggctgaatggcagcggg
aagagcacctgtgtggcgctgctggagcggttcttcgagccccaagcaggggaggtcctg
ctggatgggaagcccctgcacacctatgagcatcgctacctgcaccgacaggtggtgctg
gtggggcaggagccagtgctcttctccggctccgtgcgggacaacatcacctatgggctg
gagggctgcagcgaggagcaggtgatggctgcggcccgagcagcccatgccaatgagttc
attgacatgctggaccagggcttggagaccgacgtgggagagaagggcgggcagctgtcg
gtggggcagaagcagcggatcgccatcgcccgggccctgatccggcagccgagggtgctg
atcctggacgaagccaccagcgcactggatgtagagagcgaggctgtggtccgtgcagca
gtgctgagcggaggggcccgcacagtaatggtgatcgcccaccgcatggcaacggtggag
ggggctgaccacatcgtggtgctggagggtggtgccgtgaccgagcaggggacacacgct
gagctcatggcacaccagggaccctactaccgcctggtgcagaggcagctcattgagtaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (20)   

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