KEGG   Alligator mississippiensis (American alligator): 102564378
Entry
102564378         CDS       T03087                                 
Name
(RefSeq) zinc finger protein 239
  KO
K09228  KRAB domain-containing zinc finger protein
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:amj00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102564378
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amj03000]
    102564378
Transcription factors [BR:amj03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    102564378
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 KRAB zf-C2H2_6 Zn-ribbon_8 zf-C2H2_jaz zf-met Zn_ribbon_SprT zf-C2HC_2 zf-C2H2_11 zf-Di19 C1_4 DZR RUBY_RBDX C1_1 Zn_Tnp_IS1595 HVO_2753_ZBP FYVE zf-C2H2_5 Zn_ribbon_recom
Other DBs
NCBI-GeneID: 102564378
NCBI-ProteinID: XP_019342546
Position
Un
AA seq 386 aa
MEIREAFEDVALYFTREEWELLEDESKGLYRDQMLRNYQALVSLGYRGPVPDLICCIQQE
KVELWVCAEEHHGEISRWEDLPPGGAWLLSRTEVQRPVEGSANLEPVLTSPGSLGEMDVL
RPEQKQWHKSQWWLQTLDNVVVNQVPSPTRYESGEGREARKSPGCKEETVELRVLESHTS
KVHFRQRQSRQCPDCGKSFTRSSSLTRHWRIHTGEKPYRCSECGKSFAQSCNLVHHQRVH
TGEKPYRCPVCGKSFTQSSSLGLHQLLHTGEKPHWCPECGKSFIQYCRLAEHQLIHTGEK
PYECSVCGKSFSTPTYLTRHQSIHTRKKPYRCSVCGKSFTRSYTVFQHQRIHTGEKPYLC
LECGKSFTYSSSLALHQRIHTEEKPH
NT seq 1161 nt   +upstreamnt  +downstreamnt
atggagatccgggaggcctttgaggacgtggctttgtattttacgcgggaggagtgggag
ctgctggaagatgaaagcaaggggctttaccgggaccagatgctgaggaattaccaagcc
cttgtttccctgggataccgaggtcccgtgcctgacttaatctgctgcatccagcaagaa
aaggtggagctgtgggtctgtgctgaggagcaccatggggaaatctcaaggtgggaggac
ctgccgccaggaggtgcctggctgctgagcagaactgaggtgcagcgtcctgtggaaggc
tctgcaaacctagagccagtactaacttccccagggagtttgggtgagatggatgtgctg
cgacctgagcagaagcaatggcacaagagtcaatggtggctccaaacgctggataatgta
gtggtaaaccaggtcccatctccaactaggtatgagagtggagaagggagagaagccaga
aagagccctgggtgcaaggaagaaactgtggagttgagagtcctggagagccacacgtca
aaggtccacttcagacagagacagtcacgtcagtgccctgactgtgggaagagcttcacc
cgatcctccagcctgacccgacactggcgcatccacacaggggagaagccatatcggtgc
tctgaatgtgggaagagctttgcccaatcatgcaacctggtccaccaccaacgcgtccac
acaggggagaagccatatcgatgccctgtgtgtggaaagagcttcactcagtcatctagc
ctgggcctgcaccagcttctccacacaggggagaagccacattggtgccctgaatgtggg
aagagcttcatccagtactgcaggctggctgagcaccagcttatccacacaggggaaaag
ccatatgagtgctctgtgtgtgggaagagcttcagcacacccacctacctgaccaggcac
cagagtattcacacacggaagaagccatatcgatgctctgtgtgtgggaagagcttcacc
cgatcctacactgtgtttcagcaccagcgcatccacacaggggagaaaccatatctgtgc
cttgagtgtgggaagagctttacctattcttccagcctggctctgcaccagcgcatccac
acagaggagaagccacattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (21)   
   Pfam (21)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system