KEGG   Alligator mississippiensis (American alligator): 102566461
Entry
102566461         CDS       T03087                                 
Name
(RefSeq) elongation factor 1-alpha, oocyte form-like
  KO
K03231  elongation factor 1-alpha
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102566461
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amj03019]
    102566461
   03016 Transfer RNA biogenesis [BR:amj03016]
    102566461
   03012 Translation factors [BR:amj03012]
    102566461
   04131 Membrane trafficking [BR:amj04131]
    102566461
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amj04147]
    102566461
Messenger RNA biogenesis [BR:amj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     102566461
Transfer RNA biogenesis [BR:amj03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    102566461
Translation factors [BR:amj03012]
 Eukaryotic type
  Elongation factors
   102566461
Membrane trafficking [BR:amj04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    102566461
Exosome [BR:amj04147]
 Exosomal proteins
  Proteins found in most exosomes
   102566461
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4
Other DBs
NCBI-GeneID: 102566461
NCBI-ProteinID: XP_006268032
Position
Un
AA seq 461 aa
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLVVGVNKMDSTEPPYSGKRYQEITKEVSAYIKK
IGYNPATVAFVPISGWHGDNMLEASAKMPWFKGWKITRKEGNVAGTTLMEALDSIVPPSR
PVEKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMVVTFAPSNVTTEVKSVEMHHEALA
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGSFTSQVIILNHPGKIAAGYSPV
LDCHTAHISCKFAELREKIDRRSGKKLEDNPAALKSGDAAIIRMIPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKAVEKKASVVAKVTKSAVKAGKK
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggggaaagaaaagattcacatcaacatcgtggtgatcggccatgtggactcggggaag
tccaccaccaccgggcacctcatctacaagtgcggaggcatcgacaagaggacgattgag
aagtttgagaaggaggcagccgagatgggcaagggctccttcaagtacgcttgggtgctg
gacaagctgaaggcagagcgggagcgtggcatcaccatcgacatctccctatggaagttc
gagaccaccaaatactacatcaccatcattgatgcccctgggcaccgcgatttcatcaag
aacatgatcacgggcacctcacaggctgactgtgcagtgctgatcgtggctgcgggcgtg
ggggagttcgaggctggcatctccaagaacgggcagacccgggagcatgccctgctggcc
tacacgctgggggtgaagcagctcgttgtgggggtgaacaagatggactccacggagccc
ccatacagcgggaagcgctaccaggagatcactaaggaagttagcgcctacatcaagaag
atcggctacaaccctgccaccgtggcctttgtgcccatctccggctggcatggggacaac
atgctggaagccagtgccaaaatgccctggttcaaaggctggaagataactaggaaggaa
gggaacgtggcaggcaccactctgatggaggctctggactccatcgtccctccttcgcgc
cccgtggaaaagcccctccgcttgcctctgcaggatgtctacaagatcggcggtatcggc
actgtccccgtggggcgcgtggagacgggcaccttgaaggctggcatggtcgtgaccttt
gctcccagcaatgtcaccacagaggtgaagtcggtggaaatgcaccacgaggccctggct
gaggccctgcctggggacaacgtgggcttcaacgtaaagaacgtgtctgtgaaggacatt
cgccgggggaatgtggccggagacagcaagaatgacccgcccatggaggcaggcagcttc
acctcccaggtcatcatcctgaaccacccaggcaagatcgctgctggctactccccagtg
ctggactgccacacggctcacatctcctgcaagtttgctgagctgcgggagaagattgac
cgcaggtccggcaagaagttggaggacaatcctgcagcgctgaagtctggggatgctgcc
atcattcggatgatccctggcaagcccatgtgtgtggagagcttctccgagtacccacct
cttggccgctttgccgtgcgggacatgaggcagacggtggcggtgggtgtgatcaaggct
gtggagaaaaaggccagtgtagtagccaaagtcaccaagtcagctgtgaaggctggtaag
aaatga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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