KEGG   Alligator mississippiensis (American alligator): 102569751
Entry
102569751         CDS       T03087                                 
Symbol
TNF
Name
(RefSeq) tumor necrosis factor
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04010  MAPK signaling pathway
amj04060  Cytokine-cytokine receptor interaction
amj04150  mTOR signaling pathway
amj04210  Apoptosis
amj04217  Necroptosis
amj04350  TGF-beta signaling pathway
amj04620  Toll-like receptor signaling pathway
amj04621  NOD-like receptor signaling pathway
amj04622  RIG-I-like receptor signaling pathway
amj04625  C-type lectin receptor signaling pathway
amj04920  Adipocytokine signaling pathway
amj05132  Salmonella infection
amj05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:amj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102569751 (TNF)
   04350 TGF-beta signaling pathway
    102569751 (TNF)
   04150 mTOR signaling pathway
    102569751 (TNF)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    102569751 (TNF)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    102569751 (TNF)
   04217 Necroptosis
    102569751 (TNF)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    102569751 (TNF)
   04621 NOD-like receptor signaling pathway
    102569751 (TNF)
   04622 RIG-I-like receptor signaling pathway
    102569751 (TNF)
   04625 C-type lectin receptor signaling pathway
    102569751 (TNF)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    102569751 (TNF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102569751 (TNF)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102569751 (TNF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:amj04052]
    102569751 (TNF)
   00536 Glycosaminoglycan binding proteins [BR:amj00536]
    102569751 (TNF)
Cytokines and neuropeptides [BR:amj04052]
 Cytokines
  Tumor necrosis fators
   102569751 (TNF)
Glycosaminoglycan binding proteins [BR:amj00536]
 Heparan sulfate / Heparin
  Cytokines
   102569751 (TNF)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 102569751
NCBI-ProteinID: XP_006258274
UniProt: A0A151NR33
Position
Un
AA seq 231 aa
MTMSSENLVPDVEKGTVVVVRESRPRSDPWKCLGISSFLLLVGATVVLAFLHFRAGQQAL
RESRALSEPLEAGPRTMKLQAERAQKPAAHVVATIEGDHLKWDAEVAPTMLLHGMKLVKN
KLVVPQNGLYFVYSQVVFRGQACPEEDLSLTISRYAVEYPTDKALLTAFKSVCVGSPAPG
PSPTSDQWLESLYQGAVFRLEKGDEISSQPASTKYVDAESDQVYFGVIGMD
NT seq 696 nt   +upstreamnt  +downstreamnt
atgactatgagctcagagaacctggtcccagatgtggagaaggggactgtcgtggtggtg
agggagtcacggccccgcagtgacccctggaagtgcttggggatctcttctttcctcctg
ctggtgggggccaccgttgtcctggccttcctgcatttcagggctggccagcaggcactc
agagaatccagggccctttctgaacccttagaagcgggtcccaggacaatgaagttacaa
gcagaaagagctcagaagccagcagcacatgtcgtagccaccatcgagggtgaccacctc
aagtgggatgccgaggtagcacccaccatgctgctgcatgggatgaagctggtcaagaac
aagctggtggtgccgcagaatgggctctacttcgtctactcccaggtggtcttccgtggc
caggcctgccccgaagaagaccttagcctcaccatctcccgctatgctgtggagtacccc
acggacaaggccctgctcacagccttcaagtcagtgtgcgtggggtccccggccccaggt
ccatccccgacctccgaccaatggcttgagtccctctaccagggtgctgtcttccggttg
gagaagggcgacgagatctcttcccagcctgccagcaccaagtatgtggatgcggagagt
gaccaggtgtatttcggggtgattgggatggattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (13)   
   KEGG PATHWAY (13)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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