KEGG   Alligator mississippiensis (American alligator): 102572501
Entry
102572501         CDS       T03087                                 
Name
(RefSeq) sodium channel protein type 5 subunit alpha-like
Organism
amj  Alligator mississippiensis (American alligator)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc PKD_channel GPHH Lustrin_cystein IQ DUF2371
Other DBs
NCBI-GeneID: 102572501
NCBI-ProteinID: XP_019354770
Position
Un
AA seq 1706 aa
MDPSLLLAAAYGFRRFTPNSLFEIENRIAENKAKQAQAKQDNSSQQVKEEQCSPQLDLKA
CNKLPTIYGKPSPELVGVPLEDLDPYYSDHKTFMVLNSKNIIFRFSATPALCILGPFNPI
RRAAIKILVHSLFILFIICVVVLNCVLMAQFPSSEQSKVTEYIFTGIYTAEISIKILARG
FVWNEFTFLRDPCDCLDFIVIIMTYISLIGPLQNVSALRTFRVLRTFKAISVLPGLKVIV
NALIQSVRKLANVMILTVFCLSVFALVGLQLFTGHLQRKCVLNNITYNESLCKEAKVYDP
NSPGDVCARMKNSNDILLCNPNSELKCPENYSCEAHKPNPDFGYTSFDNFGWAFLSMFRL
MTQDSWERLYRQVIRTTGKTSMIFFVVVIFLCSFYLFNLILAVVTMAYEEQNQATQAEIQ
AKEKLFQEAEELLKKEQMKSARKTDTATTNSFKGRTTEPEGFGDDERIFHSQPAHCQKKL
KKILTSYDVSLDAVNDAYQRQRLMSAASIITDNMTLKRSIWKCPPSWNRFAQKYLIWQCC
PLWIRIKESVKLIGMDPLTDLFFTLCIVVNTVVLALEHPTMNQKYKDLINIINHVFTGIF
TAEMILKMIALDPYYYFQEHWNIFDSLIVVLGLMSIPKEINLSFLKLLRIFKLAKSWPAL
NKLMKIILKSFGALSNLTLVLIITVFIFAVVGKQVLGSYYENSTRISTDGKLRWHMKDLS
HSLLIVFRILCGEWIETMWECMEVAGKARCLPVFLTVLVIGNLVVLNLFIALLLSSFSSN
TQTTPEGTEMKLQLAFDRIYSGLQFMKRIISDQIGKILRQELTLQACQKAKMKATAPAMK
MYEDFVMDTKTSVCVPIAEEDLYSMEYDDSCSMYSTEMEYGKWERHLRHREQSKSSGTLS
QLSRTSASESMISMDTLQKENQQKNLDAMSCSEASTVDMYTFVGNYQLAEKPSTPEDCFT
EGCVRYFPFCSVDITKYPGDTWWRFRKTCFRIVEHNWFENFIIFMIVLSSGSLAFEDIYL
ENRKNIQNLLNFADIMFTYIFFLEMILKWVAYGFQKYFTSAWCWLDFVIVWISFISFGPK
STSILEYLCAQQSSLKSIRTLRALRPLRALSRFEGIKVAVHALLGAIPSILNVMLVCVVF
WLLFNLIGVNEFGGKFWKCTNISPNMNITNKNDCVNFNVTGSLKWENTYVNFDHVGMGYL
ALLQVATFKGWMDIMYAAVDSHGTDLQPTFEYRVYIYIYFVVFIIFGSFFMLNLFIGVVI
NNFNEQRKKLGGKELFLTQDQKKYYNALKKLGSKKPQKPIPRPLNKFQGFVFDIVSHQAF
DIAIAIFICLNMIAMMAENEDENTKTILMQINLVFILIFTGEFILKFLGLRHYYFTNGWN
IFDLVIVILSLINLALSEVFKTFLSPTLLRIIRLARIGRILRLIRAAKGIRTLLFALLMS
LPALFNIGLLLFFVMYIYAILGMNNFACVGWNGGIDDIFNFQTFVGSMLCLFQITTSAGW
DGLLSPLLTSTSCAPNLNVTNLKLSCGDPSIGILFFVSYVIITFLIVVNMYIAVILENFN
VATEESAEPLSDDDFDIFYEIWGKFDPKATQFIKYSALSDFADALAEPLRIPKPNHLELI
AMDLPMVSGEKIHCLDILFAFTKRVLGEYGDMDALRVQMEERFMAANPSKTSCKPITTTL
RRKQEEVSAIVIQRAVRSYLLQCSVK
NT seq 5121 nt   +upstreamnt  +downstreamnt
atggaccccagtcttttgttagctgctgcttatggtttccgccgtttcactcctaattct
ttgtttgaaattgagaatagaattgctgagaataaagcaaaacaagctcaagccaagcag
gataatagcagtcagcaggtcaaagaagaacaatgttctccccagctggatctgaaagct
tgcaacaaattgcctactatctatggaaaaccttcaccggagcttgttggagtaccattg
gaggatcttgatccttactacagtgaccacaagacttttatggtactgaatagcaagaat
ataatttttcgatttagtgcaacacctgccttatgcatacttggccctttcaatcctatc
agaagagcagcaattaaaattttggtccattcattgttcattctgttcattatctgtgtt
gtggtacttaactgtgtactcatggctcaatttccatcctcagaacaatccaaagtcact
gagtacatttttactggtatttacaccgccgaaatatcaataaaaatattggcaagagga
tttgtctggaatgaattcacttttcttagagatccatgtgattgcctagacttcattgtt
atcattatgacgtatataagcctcattggaccacttcagaatgtttcagctcttcggact
ttcagggtactaaggacttttaaagcaatttcagtactccctggtctgaaagtcattgta
aatgcacttatccagtctgttaggaaacttgccaatgtgatgatcctcactgttttctgc
ttgagtgtcttcgcccttgtaggccttcagctctttacgggccacttgcaacgtaaatgt
gtcctcaacaatattacatataatgaatcactttgtaaggaagctaaagtatatgatcca
aacagtccaggagatgtctgcgccagaatgaagaattccaatgacatattactgtgtaac
ccaaattcagaacttaaatgtccagagaactattcctgtgaggctcataaacccaatcct
gattttggttacacaagctttgataattttggctgggcctttctctccatgtttcgtttg
atgacacaggattcctgggagcgtctctatcgtcaagttatccgaactactggaaagaca
agcatgatcttttttgtggtggtcatttttctatgttcattttatctcttcaacttgatc
ttggctgttgtaactatggcatatgaagagcaaaaccaagccacacaagctgaaatacaa
gcaaaggagaaattgtttcaggaagctgaggaactactaaagaaagaacagatgaagagt
gctagaaaaacagatacagccacaactaattcctttaagggaaggactacagagcctgaa
ggctttggagatgatgaaaggatttttcactcacagcctgcccactgccaaaaaaagctt
aagaaaatattgacatcttatgacgtatcactggacgcagttaatgatgcctatcaaaga
caaaggttaatgagtgcagccagcatcattactgataacatgacattgaaaagatcaata
tggaaatgtcctccatcttggaatcgctttgcccaaaaatatcttatttggcaatgttgt
ccactatggatacgtattaaagagagcgtgaagctaataggaatggatccacttactgac
ctctttttcactttgtgtattgtggtaaatactgtagtgttggcactagagcaccccact
atgaaccagaagtacaaagacttgattaatataatcaatcatgtcttcactggaattttt
acagcagaaatgatcttgaaaatgattgctctagacccctactactattttcaagagcac
tggaatatttttgacagcttaattgttgtgttaggcctaatgagcatacctaaagaaata
aacctgtcatttctcaaattgctgagaatcttcaaattggcaaaatcctggccggcctta
aataagcttatgaaaataattttgaagtcatttggtgccttgagtaacctcactctggtt
ttgattatcaccgtgtttatttttgctgtagtaggaaaacaggttttgggaagctattat
gagaatagtactcgaataagtacagatgggaagttacgctggcatatgaaagatctctct
cattcattacttattgtattccgaattttatgtggagaatggattgaaaccatgtgggaa
tgtatggaagtggctgggaaagcacggtgtcttcctgtcttcctgacagtcctggtgata
ggaaatctagtggtactcaacttgttcattgccctgctcctgagttctttcagtagtaac
acccagacaacaccagaagggactgaaatgaaacttcagcttgcttttgatcgtatttac
agtggtttgcagttcatgaaacgcatcatatcggatcaaattggcaaaatactgagacaa
gagctgacactgcaagcctgtcagaaggctaaaatgaaagcaactgccccagccatgaag
atgtatgaggattttgtgatggatactaaaacatctgtctgtgtccccattgctgaggaa
gacctgtacagcatggaatatgatgattcatgcagcatgtactccacagaaatggagtat
ggaaaatgggaacgccacctgagacacagagagcaaagcaaaagttcaggaaccttaagt
cagttgtccagaacttctgcaagcgagagcatgatatccatggatacactacagaaggaa
aatcaacaaaagaatctagatgccatgagctgttctgaggccagcacagtggatatgtat
acttttgtggggaattaccaactagctgaaaagccaagcacacctgaggactgttttaca
gaaggctgtgtccgatattttccattctgttcagtggacatcacaaaatacccaggtgac
acttggtggagatttaggaaaacctgcttcagaattgttgaacataactggtttgaaaat
tttatcatattcatgatagtgctgagcagtggaagtctggcatttgaagacatttacctt
gaaaacagaaaaaatattcaaaacctgctgaactttgctgatataatgtttacctacatc
tttttcctggagatgattctgaaatgggtagcttatggcttccaaaagtatttcaccagt
gcctggtgttggcttgattttgttatagtgtggatttcattcatctccttcgggccaaaa
agtacatcgattctggaatatctctgtgctcagcagagttccttgaaatctattagaaca
ctacgggcattgagacccctacgagccttatccagatttgaaggcataaaagttgctgta
catgcccttctaggagctatcccttccatcctgaacgttatgctcgtctgtgttgtcttc
tggctcctatttaacctcataggagtgaatgaatttggggggaaattttggaaatgcact
aatatatccccaaatatgaatattactaacaaaaatgactgtgttaatttcaatgtgact
ggttccctaaagtgggaaaatacttatgtaaactttgatcacgttgggatgggttacctg
gctcttcttcaggtggcaacttttaaaggctggatggacattatgtatgcagcagtggat
tcacatgggactgatctgcagcctacatttgaatatcgtgtatacatatacatatatttt
gtggtatttataatttttggatcattcttcatgttgaaccttttcatcggagttgttatc
aacaattttaatgaacaaagaaaaaagttaggtggaaaagagctatttttgacacaggat
cagaaaaaatattataatgcattgaagaaacttgggtccaagaaaccacaaaaacccatc
ccaaggcccctgaacaaattccaaggttttgtttttgacattgtatcccaccaagcattt
gatattgccattgcaattttcatctgccttaacatgattgccatgatggcggaaaatgag
gatgaaaacactaaaaccattcttatgcaaatcaacttggtctttattctcatctttact
ggagaattcatcctgaaatttctgggcctaagacattactactttactaatggttggaat
atatttgatttagttattgtgatcctttcattaatcaatttggcactttctgaagtcttc
aagactttcctctctcctacgcttttgagaattattcgcttggcacggattggccgaatc
ctaagactaattcgagcagctaaaggaattagaactctcctttttgcattattgatgtcc
cttcctgctctgttcaacattggtctgttgttgttttttgtcatgtatatttatgctatt
cttggcatgaataattttgcctgtgttggttggaatggcgggattgatgacattttcaac
ttccaaacctttgttggcagcatgctctgtctcttccaaattacaacatcagctggctgg
gatgggcttctgagccctttgttaactagcacttcatgtgctccaaatttaaatgtaaca
aatttaaaacttagttgtggagacccttctataggtattctattttttgttagttatgtc
atcataacatttctcattgttgtaaacatgtacatagctgttattttagaaaacttcaat
gttgctactgaagaaagtgcagaacctctaagtgatgatgactttgatatattttatgaa
atctggggaaaatttgatcctaaagcaactcagtttattaagtattctgcactttcagac
tttgcagatgctttggcagaacctttacgcataccaaaaccaaaccatcttgagcttata
gcaatggaccttcccatggtcagtggagagaagatccactgcttggatatcttgtttgct
tttaccaaacgagtgttaggagaatatggagatatggatgctctgagagtacagatggag
gaaaggtttatggctgccaacccatccaaaacttcttgcaaaccaatcacaactactctt
agaaggaaacaggaggaggtgtctgccattgttattcaaagggccgtcaggagttatttg
cttcagtgttctgtgaaatag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

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