KEGG   Ailuropoda melanoleuca (giant panda): 100465010
Entry
100465010         CDS       T01329                                 
Symbol
DHX40
Name
(RefSeq) probable ATP-dependent RNA helicase DHX40
  KO
K18711  ATP-dependent RNA helicase DHX40 [EC:5.6.2.6]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aml03019]
    100465010 (DHX40)
Enzymes [BR:aml01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     100465010 (DHX40)
Messenger RNA biogenesis [BR:aml03019]
 Eukaryotic type
  mRNA processing factors
   Other processing factors
    100465010 (DHX40)
SSDB
Motif
Pfam: OB_NTP_bind DEAD Helicase_C HA2_C AAA_22 HA2_N T2SSE AAA_19 nSTAND3 DUF4685 SLFN-g3_helicase AAA_30 Flavi_DEAD RuvC_1 PhoH AAA_11
Other DBs
NCBI-GeneID: 100465010
NCBI-ProteinID: XP_002923366
Ensembl: ENSAMEG00000011567
UniProt: D2HLU8
Position
13:complement(13211308..13258479)
AA seq 779 aa
MSRFPAVAGRAPRRQEEDERSIDLQEERPSAVSIADREEKGCTSQEGGTTPTFPIQKQRK
KLIQAVRENSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAE
EMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTL
TTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREK
FCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVD
YDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYV
VDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPD
HVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVT
RLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRH
RELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKL
KQQNDFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHE
QETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDAR
RRWTNKENVKHLKDGISKEVLKKMQRRNDDKSISDARARFLERKQQRSQDHSDTRKETG
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgtcccggtttcccgccgtcgcgggcagggcgccaaggcggcaggaggaggatgagcgg
tcaatagaccttcaggaagagcggccttcggctgtttccatcgctgatagagaagagaaa
ggatgcacatcacaggagggaggaactactccaacttttcctattcaaaaacaaagaaaa
aagcttattcaagctgtgagggagaattcattccttattgttactggaaatacaggaagc
ggtaaaacaactcaactcccaaaatatctttatgaagcagggttttcacaacatggtatg
attggtgtgactcaaccacgaaaagtcgctgctatatcagttgctcagagggttgctgaa
gaaatgaaatgcactttgggatccaaagtagggtaccaagttcgtttcgatgattgcagc
tctaaggaaaccgcaatcaaatatatgactgatggatgtttactgaaacatattctggga
gatccaaatcttaccaagttcagtgtcattattttagatgaagcccatgagagaactcta
actacagacatcttatttggtttattgaagaagttatttcaggagaagtctcctaataga
aaggaacatttgaaggtcgtggtgatgtcagcaacaatggaattagccaagctttctgca
ttctttggaaattgtccaatatttgatatacctggaaggctttatccagtcagagaaaaa
ttctgtaatttgattggcccacgagacagagaaaatactgcatatattcaagcgattgtg
aaagtgaccatggatatccatttgaatgaaatggctggagacatcctggtttttctgact
ggtcagtttgaaattgaaaaaagttgtgagttactttttcagatggcagagtctgttgat
tatgattatgatgttcaagatacaactctggatggtttgttaatattgccatgttatgga
tctatgacaacagatcaacagaggagaatattcttgccacctccacctggaattagaaaa
tgtgtcatatctactaatatttctgcaacatctttgacaatagatggaatcagatatgtg
gtagatggtggctttgtgaagcagttaaatcacaatcccagattagggttggacatcctg
gaggtggttccaatttcaaagagtgaggcattacagcgaagtggccgagctggcaggact
tcctcaggaaaatgctttcggatctatagtaaagatttttggaaccagtgtatgcctgac
catgtgattcctgagattaagagaactagtttgacatctgtagttctgaccttaaagtgc
cttgccatacacgatgttataaggtttccctatttggatccacccaatgagagactcatt
ttggaagctcttaaacaactttaccagtgtgatgctattgacaggagtggccatgtaacc
agattgggtttgtctatggtggaatttcctctccctccacatctgacatgtgcagtaata
aaggctgcttctctggattgtgaagatctgctacttccaatagcagcaatgttgtctgtg
gaaaatgtcttcattagaccagttgatccagagtaccagaaggaagcagaacaaagacat
cgagaattggcagctaaagctggaggatttaatgactttgcaactttagctgtcatcttt
gaacagtgcaaatcaagtggagctccagcttcgtggtgccaaaaacattggattcattgg
agatgcttattttctgcatttcgtgttgaagctcaacttcgagaactaatcaggaagctt
aaacagcaaaatgatttcccaagagagacctttgaaggccctaaacatgaagtactacga
agatgtctttgtgcaggctatttcaaaaatgtagctcgaagatctgttgggagaacgttt
tgcacaatggatgggcgtggaagcccagttcacattcatccttcctcagcacttcatgaa
caagaaaccaaactcgaatggatcatttttcatgaggtattagttaccaccaaagtctac
gcaagaattgtgtgtccaatccgttatgaatgggtgagagacctgttacccaagttgcat
gaatttaatgcacatgatttgagcagtgtggcccgacgtgaagtgagagaagatgcaaga
aggagatggacaaataaggaaaacgtaaagcatctaaaggatggaatctcaaaagaagtc
ctaaagaagatgcaaagaagaaatgatgataaatccatatcagatgcacgtgctcgtttc
cttgagcgaaagcagcagaggtcccaggatcacagtgacacacggaaagaaacaggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (41)   

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