KEGG   Ailuropoda melanoleuca (giant panda): 100472092
Entry
100472092         CDS       T01329                                 
Symbol
DDX43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
  KO
K17043  ATP-dependent RNA helicase DDX43 [EC:5.6.2.7]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aml03041]
    100472092 (DDX43)
Enzymes [BR:aml01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100472092 (DDX43)
Spliceosome [BR:aml03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    100472092 (DDX43)
SSDB
Motif
Pfam: DEAD Helicase_C KH_1 MOEP19 KH_2 ResIII P-loop_SecA
Other DBs
NCBI-GeneID: 100472092
NCBI-ProteinID: XP_011219786
Ensembl: ENSAMEG00000007851
UniProt: G1LMN7
Position
19:25393720..25411708
AA seq 649 aa
MSKQEAGANASSRVVASRRSSAVSRAPERRPAEGPNRRGQEARRGGRGGGWTNPSGLQQP
VAPGLREPPLCFGLKNAWVGAVIGRGGSKIKDIQSTTNTKIQITKGHLEEAEVRIFGSKV
MQAKAKTVIDNLVKKQENYSSKLRTDIGAFQPSVGRDVKTDNNVTENQPLIDWDQIREDA
LKWGKKKWEDLPPIKKNFYVESEATSTMSQVQVDNWRKENYNIMCDDLKENEKRSIPNPT
CKFEDAFQRYPEVMENIKKAGFQKPTPIQSQSWPIVLQGIDLIGVAQTGTGKTLSYLMPG
FIHLDSQPVIRGQRNGPGMLVLTPTRELALQVEAECSKYSYKGLKSVCIYGGGDRNGQIQ
DLKKGVDIIIATPGRLNDLQMNNFVNLRSVTYLVLDEADKMLDMGFEPQIMKILLDVRPD
RQTIMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLMAVSTVKQNIIVTTEEEKCSHIQTF
LESMSPKDKVIVFVSRKATADHLSSDLILRHVSVESLHGNREQSDRERALENFKTGKVRI
LIATDLASRGLDVLDITHVYNYDFPRNIEEYVHRVGRTGRAGRTGISITLLTRNDWRVAG
ELINILERAQQSIPEDLVAMAKRYEANKLKKEMEEKLGKPQGKPQRFYY
NT seq 1950 nt   +upstreamnt  +downstreamnt
atgtcgaagcaagaagcaggcgccaacgcctcctcaagggtcgttgcttcccggcgaagc
tcggcagtgtcacgtgctccggaaaggaggccggcggagggcccgaatcgaagaggtcag
gaggcccgtaggggcggcagaggtggcggctggacaaatccctccggcctccagcaacct
gtggcccctggcctccgagaaccgccgctttgctttggattgaagaacgcgtgggtggga
gctgtgatcggtcgtggcgggtcgaaaataaaagacattcagagtacaacaaacacgaaa
atacagataacaaaaggtcatctggaagaagcagaggtcagaatctttggcagcaaggtg
atgcaggcaaaggccaaaacagtgatagataatcttgttaaaaaacaagaaaattacagt
tcaaaactcagaactgatattggtgcattccagccttctgttggaagagatgtgaagaca
gataataatgttacagagaatcagccattgattgattgggatcaaattcgagaagatgct
ttgaaatgggggaaaaaaaagtgggaagatttaccaccaattaagaaaaacttttacgtg
gagtcagaagcaaccagtacaatgtcacaagtgcaagtagacaattggaggaaagaaaat
tataatataatgtgtgatgacttgaaagaaaatgagaagcgttctatacccaatcctact
tgtaaatttgaggatgctttccagcgttatcctgaggttatggaaaacattaaaaaggca
ggctttcaaaaaccaacgccaatccagtcacagtcatggccgatagttctacaaggcata
gatcttataggagtagcccaaactggaacagggaagacattgtcctacttaatgcctgga
tttatacacttggactcacagcctgtaattagaggacaaaggaacggacccggcatgtta
gtccttacacctacgcgggagttagcacttcaagtggaagcggaatgttctaagtattca
tataaaggccttaaaagtgtgtgtatatatggcggcggagatagaaatggacaaatacaa
gatctgaaaaaaggagtagatattattattgcaactcctggaagactgaatgatctacaa
atgaataactttgttaacctccgaagtgtaacctacttggtattagatgaagccgacaag
atgctagatatgggatttgaaccccagataatgaagattttattagatgtgcgcccagac
aggcagactattatgacaagtgcaacatggccatatgctgtccgtcgccttgcacagtct
tatttgaaagagccaatgattgtatatgttggtactttggatctaatggcagtaagtaca
gtgaaacaaaacataattgtcaccacagaagaagagaaatgctctcatatccaaactttt
ctagaaagcatgtctcccaaagacaaagtcatagtgtttgtgagcagaaaagctactgct
gaccacctatcaagcgacctcattctgcgacatgtgtcagtggaatcccttcacggtaac
agggagcagagcgaccgagagagggcattagaaaactttaaaacaggtaaagtaagaata
ttgattgccacagacttggcatctcggggtcttgacgtccttgatatcacacacgtgtac
aattatgatttcccgcggaacatcgaagaatacgtgcacagagtagggcgcactggaaga
gcagggaggaccgggatatctattactcttctcactagaaatgactggagggttgctggc
gagttaattaatattctggaaagagcacaacagagtatcccagaggatcttgtggcaatg
gccaagaggtacgaggcgaataaactgaaaaaagaaatggaagaaaaattggggaaaccc
caaggaaaaccccaaaggttttattattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (34)   

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