KEGG   Ailuropoda melanoleuca (giant panda): 100474510
Entry
100474510         CDS       T01329                                 
Symbol
FARSB
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit isoform X1
  KO
K01890  phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    100474510 (FARSB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:aml01007]
    100474510 (FARSB)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:aml03016]
    100474510 (FARSB)
Enzymes [BR:aml01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.20  phenylalanine---tRNA ligase
     100474510 (FARSB)
Amino acid related enzymes [BR:aml01007]
 Aminoacyl-tRNA synthetase
  Class II (U)
   100474510 (FARSB)
Transfer RNA biogenesis [BR:aml03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    100474510 (FARSB)
 Prokaryotic type
    100474510 (FARSB)
SSDB
Motif
Pfam: tRNA_synthFbeta PhetRS_B1 B5 B3_4 EAD7
Other DBs
NCBI-GeneID: 100474510
NCBI-ProteinID: XP_002930687
Ensembl: ENSAMEG00000005984
UniProt: G1LHG8
Position
2:complement(184166460..184231796)
AA seq 589 aa
MPTVSVKRHLLFQALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNEKAEGASDV
VLYKIDVPANRYDLLCLEGLVRGLQVFKERIKPPVYKRVMPNGEIQKLIITEETAKIRPY
AVAAVLRNIKFTKDRYDSFIELQEKLHQNICRKRTLVAIGTHDLDTLSGPFTYTAKRPSD
IKFKPLNKTKEYTACELMNIYKTDNHLKHYLPIIENKPLYPVIYDSNGVILSMPPVINGS
HSKITVNTRNVFIECTGTDFTKAKIVLDVIVTMFSEYCENQFTVEAAEVVFPNGKSYTFP
ELAYRKEIVRADLINKKVGIRETPENIAKLLTRMYLKSEVIGDGNQIEIEIPPTRSDIIH
ACDIVEDAAIAYGYNNIQMTLPKTCTIANQLPLNKLTELLRHDMAAAGFTEALTFALCSQ
EDIADKLGLDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDI
VVKDSSRDVGARNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLNVPPGEKKGGYVIKASEG
PAFFPGRCAEIFARGQSVGKLGVLHPDVITKFELTMPCSSLEINIEPFL
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgccgactgtcagtgtgaagcggcatctgctcttccaagccctgggtcggacctacact
gatgaagaatttgatgaactatgttttgaatttggtctggaacttgatgaaattacttct
gagaaagaaatcataagtaaggaacaaggtaatgaaaaggcggagggagcctctgatgtt
gttctttacaaaattgacgtccctgccaatagatatgatctcctgtgtttggaaggattg
gttcgaggacttcaagtcttcaaagaaaggataaagcctccagtgtataaacgggtaatg
cctaatggagaaatccagaaattgattatcaccgaagagacagctaaaatacgtccttat
gctgtggcagcagttctccgaaatataaagttcactaaagatcgatatgacagcttcatc
gaacttcaggagaaattacatcagaatatttgcaggaaaagaaccttggttgctattggt
acccacgatttggacactttgtcaggcccttttacatatactgcaaagcgaccttcagat
ataaaattcaagcctctaaataagaccaaggagtatacagcctgtgaactgatgaacata
tacaagactgacaaccaccttaaacattatttgcctatcattgaaaataaacccctgtac
ccagttatctatgatagcaatggtgtcatcctttcaatgcctccagtcatcaatggaagt
cattccaaaataaccgtaaatactagaaatgtatttattgaatgcacaggaactgacttc
actaaggcaaaaatagttcttgatgttattgtcaccatgttcagtgaatattgtgagaat
caatttacggttgaagcagctgaggttgtttttcctaatggaaaatcttatacctttcca
gaactggcttaccgaaaggaaatagtgagagctgatctaattaacaaaaaagttggaatc
agagaaactccagaaaatattgccaagcttctaaccaggatgtatttaaagtcagaagta
ataggtgatgggaatcagattgagatcgaaatccctccgaccagatctgacattatccat
gcatgtgatattgtagaagatgcggctattgcctacggatataacaacattcagatgact
ctcccgaaaacctgtaccatagctaatcaacttcctcttaataagctcacagaactccta
agacatgacatggcagccgctgggttcacggaggcgcttacctttgctctgtgctcccaa
gaagatattgccgataaacttggtttggacatctctgcaacaaaggcagtccacataagt
aatcctaaaacagctgaatttcaggtggcacgcactacccttcttcctggcctcctaaag
accatagctgcgaatcggaagatgcctcttcctctgaaactgtttgaaatctctgacatc
gtagtaaaagattctagcagagatgtaggtgcaagaaactacaggcatctctgtgctgtt
tattacaacaagaatcctgggttcgagataatccatgggttactggacagaatcatgcag
ttgcttaatgtgcctcctggtgaaaagaagggcggatatgtgatcaaagcatcagaaggc
cctgcttttttccctgggagatgcgcggagatctttgccaggggtcagagcgtcgggaag
cttggggtccttcatcctgacgtcatcaccaaatttgagctgaccatgccctgctcctcc
ctggaaatcaatattgagccctttttgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (38)   

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