KEGG   Ailuropoda melanoleuca (giant panda): 100476047
Entry
100476047         CDS       T01329                                 
Symbol
SNF8
Name
(RefSeq) vacuolar-sorting protein SNF8 isoform X1
  KO
K12188  ESCRT-II complex subunit VPS22
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:aml00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100476047 (SNF8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aml04131]
    100476047 (SNF8)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aml04147]
    100476047 (SNF8)
Membrane trafficking [BR:aml04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    100476047 (SNF8)
Exosome [BR:aml04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100476047 (SNF8)
SSDB
Motif
Pfam: EAP30 AbiEi_4 EutK_C TFIIE_alpha RPA_interact_C Plasmid_RAQPRD DUF4896
Other DBs
NCBI-GeneID: 100476047
NCBI-ProteinID: XP_002916872
Ensembl: ENSAMEG00000005062
UniProt: G1LEM3
Position
13:21957719..21966322
AA seq 258 aa
MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKSNLEEFASKHKQEIRK
NPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LEELRQQVLKGRGKFAQDVSQDDLLRAIKKLKALGSGFGIIPVGGTYLIQSVPAELNMDH
TVVLQLAEKNGYVTVSDIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALF
TDLYSQEITAEEAREALP
NT seq 777 nt   +upstreamnt  +downstreamnt
atgcatcgccgcggggtgggagccggcgccatcgccaagaagaagcttgccgaggccaag
tataaggagcgaggcactgtcttggctgaggaccagctggcccagatgtcaaagcagttg
gacatgttcaagagcaacctggaagaatttgccagcaagcacaagcaggagatccggaag
aatcccgagttccgggtgcagttccaggacatgtgtgccaccatcggggtggaccctctg
gcctccggaaaaggattttggtccgagatgctaggcgtgggggatttctattacgagctg
ggtgtccagatcatcgaagtgtgcctggccttgaagcaccggaatggaggtctgatcact
ctggaggagctgcggcagcaggtgttgaaaggaaggggcaaattcgcacaggacgtcagc
caagacgacctgctcagggccatcaagaaactgaaggcgctcggcagcggcttcggcatc
atccccgtgggcggcacctacctcattcagtctgtgccggcggagctcaacatggatcac
acggtggtgctgcagctggccgagaaaaatggctatgtgactgtcagtgatatcaaggcc
agtcttaaatgggagaccgagcgcgcgcggcaagtgctggaacacctgctgaaggaaggg
ctggcctggctggacctgcaggccccaggggaggcccactactggctgccggctctcttc
acagacctctactcccaggagattacagctgaggaggccagagaagccctcccctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (32)   

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