KEGG   Ailuropoda melanoleuca (giant panda): 100477371
Entry
100477371         CDS       T01329                                 
Symbol
TRIM4
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM4
  KO
K11998  tripartite motif-containing protein 4 [EC:2.3.2.27]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aml04121]
    100477371 (TRIM4)
Enzymes [BR:aml01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100477371 (TRIM4)
Ubiquitin system [BR:aml04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100477371 (TRIM4)
SSDB
Motif
Pfam: SPRY zf-C3HC4_4 zf-RING_UBOX zf-C3HC4 zf-B_box zf-C3HC4_2 zf-C3HC4_3 PRY zf-RING_2 zf-RING_5 zf-RING_6 TRAF3_RING zf-Nse
Other DBs
NCBI-GeneID: 100477371
NCBI-ProteinID: XP_019649325
Ensembl: ENSAMEG00000031466
Position
10:complement(6287385..6308362)
AA seq 474 aa
MEAEDLQEDLTCSICLDYFDDPVSIECGHNFCRGCLHRSWAPGGGSFPCPECRQPSPLAA
LRPNWALARLTERMRLRRQGRVPPSQCDRHREALRLFCEDDQRPVCLVCRESREHQAHTM
TPIDEAFYSYREKLLKAQCSLKDKMKKAIYFQDMEVKNATEWKEKMKNQRIRFSAEFAKL
HRFLEEEEKLFLQSLSEEEEELKKKQNENTLKLHQKITSLKQLISEVREKSESPTLELLQ
NPKDVLTRSDSQDVNYSPEILTMKTVCQIPMMKEMLKRFQVAVSVVEDTAHPKLVFSQGG
RYVKNGASASSWPLFSSAWSYVSGWRNSQNTQFVGRFQHLPCVLGKNIFTSGKHYWEVEN
RDSLEIAVGVCRGDVMGLADGSEMCPHMGIWALSWGSTGYRPLTSSPVSPTKQEPALQRV
GVFLDSDAGDISFYSAVDGTHLHTFSCPLASRLRPFFWLSPLASLVIPAVTARK
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggaagccgaggacctgcaggaggacctgacctgctctatctgcctggactatttcgac
gacccggtgtccatcgagtgtggccacaacttctgccgcggctgcctgcaccgcagctgg
gcgccgggcggcggctcgttcccctgccccgagtgccggcagccgtcgccgctcgctgcg
ctgcggcccaactgggccctggcccggctgacggagaggatgaggctccggcgccagggc
cgcgtgccccccagccagtgcgaccgccaccgggaagcgctgcggctcttctgcgaggac
gaccagcggcccgtgtgcttggtgtgcagggagtcccgggagcaccaggcgcacaccatg
acacccatcgacgaggccttctacagctaccgggagaagcttctaaaggctcagtgtagt
ctgaaggacaagatgaagaaagccatatactttcaggacatggaagtgaagaatgctacc
gagtggaaggagaagatgaagaatcagcgaataagattcagtgcagagtttgcaaagctg
caccgatttttggaggaggaagaaaaactgtttcttcagagcctgagcgaagaagaagaa
gagctgaagaagaaacagaatgagaacactttaaagctccaccagaagatcacttccttg
aagcagctcatctcagaggtccgggagaagagcgagagccccaccctggagctgcttcag
aatccaaaggatgtgttgaccaggagtgacagccaggatgtgaactattctcctgaaatt
ctaacgatgaagactgtatgccagataccgatgatgaaggaaatgctgaagcgattccaa
gtggctgtaagtgtggttgaagacacggctcatcccaagcttgtcttttcccaaggtggg
agatatgtgaaaaatggagcatcagccagttcttggccgttgttttcctcagcatggagc
tacgttagtggatggaggaactctcagaacacacagtttgtgggaagatttcagcactta
ccctgtgttttgggaaaaaacattttcacttcagggaaacattactgggaagttgagaac
cgagatagcctggagattgccgtgggggtgtgtcggggggacgtcatggggcttgctgat
ggttcagaaatgtgcccccacatgggcatttgggccctcagttggggttccactggctat
cggcccctgaccagctctcctgtaagtcccaccaagcaagagcctgctcttcagcgggtg
ggagttttcctagattctgatgctggggacatctccttctacagtgctgtggatggcaca
catctacacaccttctcttgtcctctcgcctcccgcctccggccgtttttttggttgagt
ccattagcatctttagtcatcccggcagtgacggctaggaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (47)   

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