KEGG   Ailuropoda melanoleuca (giant panda): 100481897
Entry
100481897         CDS       T01329                                 
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
  KO
K05037  solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04721  Synaptic vesicle cycle
aml04726  Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:aml00001]
 09150 Organismal Systems
  09156 Nervous system
   04726 Serotonergic synapse
    100481897 (SLC6A4)
   04721 Synaptic vesicle cycle
    100481897 (SLC6A4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:aml02000]
    100481897 (SLC6A4)
Transporters [BR:aml02000]
 Solute carrier family (SLC)
  SLC6: Sodium- and chloride-dependent neurotransmitter transporter
   100481897 (SLC6A4)
SSDB
Motif
Pfam: SNF 5HT_transport_N
Other DBs
NCBI-GeneID: 100481897
NCBI-ProteinID: XP_034496390
Ensembl: ENSAMEG00000003959
Position
13:3420100..3451870
AA seq 630 aa
METTPLNSQKEQSACKDKEDCQENGVLQKGVPVPEDKVEPGHISNGYSAVPSPGAGDDTR
HSIPAATTVLVAEAHEGDRETWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICVIAFYIASYYNTIM
AWALYYLVSSFTDELPWTSCTNSWNTGNCTNYFSGNNVTWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLSLCIMLIFTVIYFSIWKGVKMSGKVVWVTATFPYIILSILLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHVWAKRREWFVLAVVVTCFFGSLAT
LTFGGAYVVKLLEEYATGPAVLTVALVEAVAVYWFYGITQFCSDVKEMLGFSPGWFWRTC
WVAISPLFLLFIICSFLTSPPQLRLFQYDYPPWSAVLGYCVGTSSFICIPTYIAYRLIVT
PGTFKERIIKGITPETATEIPYGDIHLNAI
NT seq 1893 nt   +upstreamnt  +downstreamnt
atggagaccacacccttaaactcccagaaggaacagtcagcgtgtaaggataaagaagat
tgtcaggaaaatggagttctgcagaagggtgtccctgtccctgaggataaggtggagcct
ggccacatctccaacgggtactcagcggtgccgagcccgggtgccggagatgacactcgg
cactccattccggctgccaccaccgtgctagtggctgaggctcatgaaggggaccgggag
acgtggggcaagaagatggatttcctcctctccgtcattggctatgccgtggacctgggc
aacgtctggcgctttccctacatatgttaccagaatggagggggggcgttcctcctgccc
tacacgatcatggccattttcggggggatcccactgttctacatggagctcgcgctgggc
cagtaccaccgaaacggatgcatttcgatatggaggaaaatctgcccaattttcaaaggg
atcggttacgccatctgcgtcatcgccttctacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcgtctcctccttcaccgacgagctgccctggaccagctgc
acgaactcctggaacaccggcaactgcaccaactacttctccgggaacaacgtcacctgg
acgctgcactcgacgtcccccgcagaagaattttacacgcgccacgtcctgcagatccat
cggtccaagggacttcaggacctggggggcatcagctggcagctgtccctctgcatcatg
ctcatcttcactgtcatctacttcagcatctggaagggtgtcaaaatgtccggcaaggtg
gtatgggtgacagccactttcccttatatcatcctttccatcttgctggtaaggggggcc
accctccctggagcctggagaggtgttctcttctacttgaaacccaactggcagaaactc
ctggagacaggggtgtgggtggatgcggccgctcagatcttcttctctcttggtcctggc
tttggggtcctgttggctttcgctagctacaacaagttcaacaacaactgttaccaagac
gccctggtgaccagcgtggtgaactgcatgacgagctttgtttccggatttgtcatcttc
acagtgctcgggtacatggccgagatgcggaacgaggatgtgtctgaggtggccaaagac
gcaggccccagcctcctcttcatcacgtacgcagaagccatagccaacatgccggcatcc
accttctttgccatcatcttcttcctgatgctaatcacgctgggcctggacagcaccttt
gcaggcttggagggcgtgatcacagctgtgctggacgagtttccgcacgtctgggccaag
cgccgggagtggtttgtgcttgccgtggtcgttacctgcttcttcggatccctggccacc
ctgacttttggaggggcctatgtggtgaagctgctggaggagtatgccacggggcccgcg
gtgctcacagtggccctcgtcgaggccgtggctgtgtattggttttacggcatcactcag
ttctgcagtgacgtgaaggaaatgctcggcttcagccccgggtggttttggaggacctgc
tgggtagccatcagccctctctttctcctgttcatcatctgcagctttctgacgagcccg
ccgcagctgcgccttttccagtacgactaccccccgtggagcgccgtcctgggctactgc
gtggggacgtcgtctttcatctgcatccccacgtacatagcgtaccggctgatcgtcact
ccagggacctttaaggagcgtattattaaaggtatcaccccagaaacagcaacggaaatt
ccctatggggacatccacttgaacgccatataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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