KEGG   Ailuropoda melanoleuca (giant panda): 100482524
Entry
100482524         CDS       T01329                                 
Symbol
EXOSC9
Name
(RefSeq) exosome complex component RRP45 isoform X1
  KO
K03678  exosome complex component RRP45
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100482524 (EXOSC9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aml03019]
    100482524 (EXOSC9)
Messenger RNA biogenesis [BR:aml03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     100482524 (EXOSC9)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C DsrE
Other DBs
NCBI-GeneID: 100482524
NCBI-ProteinID: XP_002923870
Ensembl: ENSAMEG00000006133
UniProt: G1LHU1
Position
5:complement(129499160..129516934)
AA seq 440 aa
MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIKISFGTDYGCCIVELGKTRVLGQVS
CELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTES
LCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEER
DPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGI
MLLKDQVLRCSKIAGVKVLEITELIQKALENDQKVRKEGGKFGFAESIASQRITAFKMEK
APIDTSDVEEKAEEIIAEAEPPSEVVSNPVLWTPGTAQIGEGIENSWGDLEDSEKEEEDE
DGTDEAIILDSLKMDTGVEVSNIGSQDAPIVLSDSEEEEMIILEPDKNPKKIRTQTISAK
QEKAPSKKPVKKRKKKRAAN
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgaaggagacaccactttcaaactgcgagcgccgtttcctactccgcgccatcgaagag
aagaagcggctggatggcagacaaacctatgattataggaacatcaagatctcatttgga
acagattatgggtgctgtattgtggaacttgggaaaacaagagttcttggacaggtttcc
tgtgaacttgtttctccaaagctcaatagggcaacagaaggtattcttttttttaacctt
gaactctctcagatggctgccccagcttttgaacctggcaggcagtcagatctcttggtg
aagttgaatcgactcttggaaagatgtctaagaaattcgaagtgtatagacactgaatct
ctctgtgttgttgctggtgaaaaggtttggcaaatacgtgtggacctacatttattaaat
catgatgggaatattattgatgctgccagcattgctgcaattgtagccttgtgtcacttc
cgaagacccgatgtctctgtccaaggagatgaagtaacgctgtatacacctgaagagcga
gatcctgtaccattaagcatccaccacatgcccatttgtgtcagttttgccttcttccag
caaggtacatatttattggtggatcccaatgaacgagaagaacgtgtaatggatggcctg
ctggtgattgctatgaacaagcatcgagagatttgtactatccagtccagtggtgggata
atgctgctgaaagatcaagttttgagatgtagtaaaatagctggtgtgaaagtattggaa
attacagagctaatacagaaggctttggagaacgaccagaaagtaaggaaagaaggagga
aaatttggctttgcagagtctatagcaagtcaaagaatcacagcatttaaaatggaaaag
gcccctattgacacctccgatgtcgaagagaaagcagaagaaattattgctgaagctgaa
cctccttcagaagttgtttctaatcctgtgctttggactcctggaactgcccaaattgga
gagggaatagaaaactcctggggtgatcttgaagactctgagaaggaagaggaggatgaa
gatggcactgatgaagctatcattcttgatagtctgaaaatggacactggagtagaagtc
tccaatattggaagccaagatgcccctatagtactctcagacagtgaagaagaagaaatg
atcattttagaaccagacaagaacccaaagaaaataagaacacaaaccatcagtgcaaaa
caagaaaaagcaccaagtaaaaagccagtgaaaaagagaaaaaagaagagagctgctaat
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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