KEGG   Ailuropoda melanoleuca (giant panda): 100483284
Entry
100483284         CDS       T01329                                 
Symbol
RPA4
Name
(RefSeq) replication protein A 30 kDa subunit
  KO
K10741  replication factor A4
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03030  DNA replication
aml03420  Nucleotide excision repair
aml03430  Mismatch repair
aml03440  Homologous recombination
aml03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100483284 (RPA4)
   03420 Nucleotide excision repair
    100483284 (RPA4)
   03430 Mismatch repair
    100483284 (RPA4)
   03440 Homologous recombination
    100483284 (RPA4)
   03460 Fanconi anemia pathway
    100483284 (RPA4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aml03032]
    100483284 (RPA4)
   03400 DNA repair and recombination proteins [BR:aml03400]
    100483284 (RPA4)
DNA replication proteins [BR:aml03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    100483284 (RPA4)
DNA repair and recombination proteins [BR:aml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     100483284 (RPA4)
   MMR (mismatch excision repair)
     100483284 (RPA4)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     100483284 (RPA4)
SSDB
Motif
Pfam: RPA_C tRNA_anti-codon RMI2 RNA_pol_Rpb5_C
Other DBs
NCBI-GeneID: 100483284
NCBI-ProteinID: XP_011231286
UniProt: D2HT85
Position
X:67273670..67277071
AA seq 263 aa
MSNNGFVSYGSVSAVGGAIGSNDQPFQGGAAPATKAPRSRVRIQDIIPCCVNQLLTSTLV
DNVFKIRGIQVSQASVVGIIRKAERASNYILYRIDDMTTKPFEVRQWLGRNKAKQGMSLL
PVGVYVKVIGILKCFKEVKGLKVLNIRVLEDMNEFTTHILETVNAHMMLDKAHQVASGPS
APVVPSKIDEVQKYGEYYHLDFIHKEVLRLIHECPQQEGKSVHELQTQLHSLSERAIKQA
LEYLTVEGYIYSTVDEEHFKSAD
NT seq 792 nt   +upstreamnt  +downstreamnt
atgagtaataatggttttgttagctatggcagcgtctctgctgtgggtggagctattgga
agcaatgatcaaccatttcagggtggtgcagctcctgctactaaggccccaagatccagg
gtccgaatccaggatattataccttgttgtgtaaaccagctgctcacctccaccctggtt
gacaatgtcttcaagattaggggaattcaagtttcccaggcctctgttgtggggataatc
agaaaggcagagagggcttccaactacattctttacagaattgatgatatgaccaccaag
ccttttgaggtccgccagtggctcggaagaaataaagcaaaacaggggatgtctcttctt
ccagtgggagtatatgtcaaggtgatcggtatcctcaaatgttttaaagaagtaaagggc
ctcaaggtattgaatatccgagtcctggaggacatgaatgagttcaccacacatattctg
gaaacagtcaatgcacatatgatgctggataaagcccaccaagtggcctctgggcccagt
gcgcctgttgtcccatcaaaaatagatgaggtccagaaatatggggagtactaccacctc
gacttcatccacaaggaagttctgcgtttgatccatgaatgtcctcaacaggaagggaaa
agtgtacatgagctccagacccagcttcacagcctgagcgagagggccatcaagcaagcc
cttgagtatctgaccgttgagggctacatctactccactgtggacgaagagcattttaaa
tctgctgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

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