KEGG   Ailuropoda melanoleuca (giant panda): 100484369
Entry
100484369         CDS       T01329                                 
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46 isoform X1
  KO
K12590  exosome complex component RRP46
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100484369 (EXOSC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aml03019]
    100484369 (EXOSC5)
Messenger RNA biogenesis [BR:aml03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     100484369 (EXOSC5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 100484369
NCBI-ProteinID: XP_002923728
Ensembl: ENSAMEG00000011623
Position
12:35618184..35633767
AA seq 239 aa
MEGAMEGAMQADAEIRSESGTESGPRGPACSLRHFACEQNLLSRPDGSASFLQGDTSVLA
GVYGPAEVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLIRNTCEAVVLGTLHPRTSI
TVVLQVISDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALNSDGTLVLDPTAKQEKE
ARAVLTFALDSVERKLLMSTTKGLYSDAELQQCLAAAQAASQHIFRFYRESLQRRYSKS
NT seq 720 nt   +upstreamnt  +downstreamnt
atggagggggcgatggagggggcgatgcaggctgacgccgagatccgctctgagtccgga
acagagtccggcccacggggtccggcctgcagcctccggcactttgcttgtgaacagaac
ctgctgtcccggcctgatggctctgcctctttcctgcaaggggatacgtcggtcctggcg
ggcgtgtacgggccagccgaggtgaaggtcagcaaagagatcttcaacaaggccaccctg
gaggtgatcctgaggccgaagattgggctgcctggcgtcgcggagaagagccgggagcgg
ctgatcaggaacacgtgtgaagctgtggtattgggaacgctgcacccccgcacgtccatc
actgtggtgctgcaggtcatcagtgatgctggctctctcctggcctgttgcctgaacgcc
gcctgcatggcactggtggatgcaggggtgcccatgcgggccctcttctgtggggtcacc
tgtgctctgaactccgacgggaccctcgtgctggatcccacagccaaacaagaaaaggag
gcccgggccgtcctgacctttgcgctcgacagcgtggaacggaagctgctgatgtccacc
accaaggggctctactctgatgccgagctccagcagtgcctggccgcagcccaggctgcc
tcgcaacacatcttccgcttctaccgggaatcgctgcagaggcgttactccaagagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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