KEGG   Amycolatopsis mediterranei S699: AMES_1785
Entry
AMES_1785         CDS       T02190                                 
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
amm  Amycolatopsis mediterranei S699
Pathway
amm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:amm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AMES_1785 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amm03400]
    AMES_1785 (mutM)
Enzymes [BR:amm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     AMES_1785 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AMES_1785 (mutM)
DNA repair and recombination proteins [BR:amm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AMES_1785 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS TackOD1 HpcH_HpaI NFACT_N zinc_ribbon_9
Other DBs
NCBI-ProteinID: AFO75321
Position
1938716..1939585
AA seq 289 aa
MPELPEVEVVRLGLQVHVAGRTIREAEVLHPRAIRRHALGAEDFTQRLAGTRVEAARRRG
KYLWLELSDKEALLAHLGMSGQMLVQPEGAPDEKHLRVRLRFEDDGPELRFVDQRTFGGL
ALDDLSDIGSEVLLPDTIAHIARDPMDPEFDLDAAVRALRSRRTEVKRALLDQTLVSGIG
NIYADEALWRARLHWARPTEKLTMAKGRELLSAASDVMNAALGAGGTSFDALYVNVNGQS
GYFDRSLDAYGQEGMPCHRCGTAIRREPFMNRSSFSCPRCQPRPRANSG
NT seq 870 nt   +upstreamnt  +downstreamnt
atgcccgaacttcccgaggtcgaagtcgtccgcctgggcctgcaggtgcacgtcgcgggg
cggaccatccgcgaggcggaggtcctgcacccgcgcgccatccgccggcacgccctgggc
gcggaggacttcacgcagcggctcgccggcacccgcgtcgaggcggcgcggcgccggggc
aagtacctgtggctggagctgtccgacaaggaagcgctgctggcccacctcggcatgagc
gggcagatgctcgtccagccggagggcgcgcccgacgagaagcacctgcgggtgcgcctg
cgcttcgaggacgacgggccggagctgcggttcgtcgaccagcggacgttcggcggcctg
gcgctcgacgacctcagtgatatcggcagcgaggtcctgctcccggacacgatcgcgcac
atcgcccgcgacccgatggacccggagttcgacctcgacgcggcggtgcgcgcgctgcgg
tcgcggcgcaccgaggtcaagcgggcgctgctcgaccagacgctcgtgtcgggcatcggc
aacatctacgcggacgaagccttgtggcgcgcccgcctgcactgggctcggccgaccgaa
aagctgaccatggcgaagggccgcgaactgctgtccgcggcgtcggacgtgatgaacgcg
gcgctgggcgcgggcggcacgtcgttcgatgcgctgtacgtgaacgtcaacgggcaatcg
gggtacttcgaccggtcgctggacgcgtacggccaggaagggatgccgtgccaccggtgc
ggcacggcgatccggcgggagccgttcatgaaccggtcgtcgttctcgtgcccgcggtgc
cagccgcggccgagggcgaactcgggttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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