KEGG   Amycolatopsis mediterranei S699: AMES_3588
Entry
AMES_3588         CDS       T02190                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
amm  Amycolatopsis mediterranei S699
Pathway
amm00300  Lysine biosynthesis
amm00470  D-Amino acid metabolism
amm01100  Metabolic pathways
amm01110  Biosynthesis of secondary metabolites
amm01120  Microbial metabolism in diverse environments
amm01230  Biosynthesis of amino acids
Module
amm_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:amm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    AMES_3588 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AMES_3588 (lysA)
Enzymes [BR:amm01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     AMES_3588 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AFO77124
Position
complement(3942159..3943442)
AA seq 427 aa
MTSLPDHDVAELADRFGTPLYLYDGDALRERYERLRERLHPGVDIFYSAKANPNVSVCAL
LHSLGAGLEISSLAELVTAERAGATGPDVIFLGPGKSTEELRACCERGVGTIVCESFAEL
AAVDELRPPATVKVMLRVNPESESAGSRLAMGGKPRQFGVDEEILRSSRDAVSALRHIRV
TGFHAYLGTRILDATTIVRNTGTILELAESLAELLDIPLETVDIGGGWGVPYFDGEDDLD
ADAAIEGINAAVESFLDRNPATRVITELGRYLVGWAGRYIVRARYVKESKGEWFVIADGG
TNHHMAAVGIGSFVKRNFPIRALAGQDSPADRVYTVTGPLCTPNDVVAKRVWLPEVHPGD
LLEVARSGAYGPSASPVMFLSHGHPAEVLLLGGTAHLVRSRDTVEDLLRPQHLVPAELRA
PATLPAH
NT seq 1284 nt   +upstreamnt  +downstreamnt
gtgacttccctaccagaccacgatgtcgcggaactggccgaccgcttcggcacgccgctg
tacctctacgacggcgacgcactgcgcgagcggtacgagcggctgcgcgagcggctgcac
cccggcgtggacatcttctactcggccaaggcgaacccgaacgtcagcgtctgcgccctg
ctgcactcgctcggcgccggcctggagatctcctcgctcgccgagctggtcacggccgag
cgggccggggccaccggtcccgacgtgatcttcctcggcccgggcaagtccaccgaggag
ttgcgggcctgctgcgagcgcggcgtcgggaccatcgtctgcgagtcgttcgccgagctg
gccgcggtcgacgagctgcggccgccggcgacggtgaaggtgatgctgcgggtgaacccc
gagtcggagagcgccggctcgcgcctggccatgggcggcaaaccccggcagttcggggtg
gacgaggagatcctgcggtcctcgcgggacgccgtctccgcactgcggcacatccgggtg
accggcttccacgcctacctcggcacccggatcctcgacgcgaccacgatcgtgcgcaac
accgggacgatcctggagctggcggagtcgctcgccgaactgctcgacattccacttgag
acggtcgacatcggtggcggctggggcgtgccctacttcgacggcgaggacgacctggac
gccgacgccgcgatcgaggggatcaacgccgccgtcgagtccttcctggaccgcaacccg
gccacccgggtcatcaccgagctaggccgctacctggtcggctgggccggccggtacatc
gtgcgggcccgctacgtcaaggagtccaagggtgagtggttcgtgatcgccgacggcggg
accaaccaccacatggccgcggtgggcatcggcagcttcgtcaagcgcaacttcccgatc
cgcgcactggccggtcaggactcgcctgccgaccgggtctacaccgtcaccggcccgctg
tgcaccccgaacgacgtggtggccaagcgggtgtggctgcccgaggtgcacccgggcgac
ctgctcgaggtggcacggtcgggcgcctacggtccgagcgcgtcgccggtgatgttcctc
agtcacggccaccccgccgaggtgctgctgctcggcggaaccgcgcacctggtccgcagc
cgcgacacggtcgaggacctgttgcggccccagcacctcgtgcccgccgaactccgagcg
ccggccaccctgccggcgcactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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