KEGG   Amycolatopsis methanolica: AMETH_4319
Entry
AMETH_4319        CDS       T03230                                 
Symbol
groE
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
amq  Amycolatopsis methanolica
Pathway
amq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:amq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AMETH_4319 (groE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amq03019]
    AMETH_4319 (groE)
   03110 Chaperones and folding catalysts [BR:amq03110]
    AMETH_4319 (groE)
   03029 Mitochondrial biogenesis [BR:amq03029]
    AMETH_4319 (groE)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amq04147]
    AMETH_4319 (groE)
Enzymes [BR:amq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     AMETH_4319 (groE)
Messenger RNA biogenesis [BR:amq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     AMETH_4319 (groE)
Chaperones and folding catalysts [BR:amq03110]
 Heat shock proteins
  HSP60 / Chaperonin
   AMETH_4319 (groE)
Mitochondrial biogenesis [BR:amq03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    AMETH_4319 (groE)
Exosome [BR:amq04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AMETH_4319 (groE)
  Exosomal proteins of other body fluids (saliva and urine)
   AMETH_4319 (groE)
  Exosomal proteins of breast cancer cells
   AMETH_4319 (groE)
  Exosomal proteins of colorectal cancer cells
   AMETH_4319 (groE)
  Exosomal proteins of bladder cancer cells
   AMETH_4319 (groE)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AIJ24411
UniProt: A0A076MZS1
Position
complement(4449482..4451173)
AA seq 563 aa
MAKELRFGADARDLLLSGVDKLAEAVKSTLGPKGRNVIIEKITGSPVVTNDGVTIAREIH
LKNQFENMGAQLVKEAAIKTNDVVGDGTTTATVLAQAIVREGMAAIARGGNPVLVKRGID
HAVGRLVEHLEKVAHPVVTEHDYARVAAISANDDDAVGAVIAKALHTVGDTGVVTVEEAP
RIGMTVDFVEGFEFDNGYLSPYLVTDPGRLEAVLDDPYILLCSEKITKVQQLMPLLDKVM
RAPRPLVVIAETVEGTALSMLVHNHVNGTFQACAIRAPGFGDRRLHKLEDLAAVVGGAVL
SRHAGFTLETMTLDHLGRARQVRVTENKTTIVGGAGSADDVEFRVTQLRAELERAQFGVD
EDVLTERIGALTGKVAMIHVGAATPAELKELQHRVEDALSATRAAMAEGIVAGGGAALLH
AEKVLADTSLSGDYATGAEIVRRALAEPARLIAANAGYPADEVVARTRDLGQDEGFDALL
DRYGNMIEMGIIDPLRVCRSALQNGASVAGLLLTTNSLVAEEQTPWGGSPALMTEFGPLD
EGLHQPSPDSSTPQSLGMGPSVG
NT seq 1692 nt   +upstreamnt  +downstreamnt
atggcgaaggaactgcggttcggcgcggacgcccgggacctgctgctgtccggtgtggac
aagctggccgaggcggtgaagtccacgctggggcccaaggggcgcaacgtgatcatcgag
aagatcaccggttcgccggtggtcaccaacgacggcgtcaccatcgcccgggagatccac
ctgaagaaccagttcgagaacatgggcgcgcagctggtcaaggaagccgcgatcaagacc
aacgacgtggtgggcgacgggaccaccacggcgacggtgctcgcccaggccatcgtgcgg
gagggcatggcggcgatcgcgcgtggcggcaacccggtgctggtcaagcgcggcatcgac
cacgccgtcggccgtctcgtcgagcacctggagaaggtcgcgcacccggtggtcaccgag
cacgactacgcccgggtcgcggccatctccgccaacgacgacgacgcggtcggcgcggtc
atcgcgaaggcgctgcacaccgtcggcgacaccggagtggtcaccgtcgaggaggccccg
cggatcgggatgaccgtcgacttcgtggagggtttcgagttcgacaacggctatctttcg
ccgtacctggtcaccgaccccgggcggctggaggcggtgctcgacgacccctacatcctc
ctgtgcagcgagaagatcaccaaggtgcagcagctgatgccgttgctggacaaggtgatg
cgcgcgccgcggcccctggtggtgatcgccgagacggtcgagggcaccgcgctgagcatg
ctcgtgcacaaccacgtcaacggcactttccaggcctgcgcgatccgggcgcccggcttc
ggcgaccggcggctgcacaagctggaggacctcgccgcggtcgtcgggggcgcggtgctg
tcccggcatgccgggttcacgctggagacgatgacgctggaccacctcgggcgggccagg
caggtgcgggtgaccgagaacaagaccaccatcgtcggcggggcggggtccgccgacgac
gtcgagttccgcgtcacccagctgcgggcggagctggagcgcgcccagttcggggtggac
gaggacgtcctgaccgagcgcatcggcgcgctgaccgggaaggtcgcgatgatccacgtc
ggcgcggccaccccggccgagctgaaggagttgcagcaccgggtcgaggacgcgttgtcc
gcgaccagggcggcgatggcggagggcatcgtcgccggtggcggggcggcgttgctgcac
gccgagaaggtgctggccgacaccagcctgtccggtgactacgccaccggggcggagatc
gtgcggcgggcgctggccgaaccggcgcggctgatcgcggccaacgccggctacccggcc
gacgaggtggtggcgcgcacgcgcgacctcggtcaggacgagggcttcgacgcgttgctc
gaccgctacggcaacatgatcgagatggggatcatcgatcccctccgggtgtgccgctcg
gcgctgcagaacggcgcctcggtggccgggctgctgctcacgaccaactcgctggtcgcc
gaggagcagaccccgtggggcggcagccccgcgctgatgaccgagttcggtccgctggac
gaggggctgcaccagccctcgcccgattcctctacgccgcagtcgctcgggatgggcccg
tcagtgggctga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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