KEGG   Amycolatopsis methanolica: AMETH_6559
Entry
AMETH_6559        CDS       T03230                                 
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase, class II
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
amq  Amycolatopsis methanolica
Pathway
amq00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:amq00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AMETH_6559 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:amq01007]
    AMETH_6559 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:amq03016]
    AMETH_6559 (lysS)
Enzymes [BR:amq01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     AMETH_6559 (lysS)
Amino acid related enzymes [BR:amq01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   AMETH_6559 (lysS)
Transfer RNA biogenesis [BR:amq03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    AMETH_6559 (lysS)
 Prokaryotic type
   Other AARSs
    AMETH_6559 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d tRNA-synt_His
Other DBs
NCBI-ProteinID: AIJ26651
UniProt: A0A076N5S9
Position
complement(6715202..6716683)
AA seq 493 aa
MPADDLPEQMRVRRAKRDRLLAEGVEPYPVEVPRTHTLAQVRAAHPDLPADTATGEVVGV
TGRVMFSRIGGKLCFATLREGDGTELQAMISLANVGEEALAAWKADVDLGDHVYVHGEVI
TSKRGELSIMADEWRMAAKALRPLPVAHKELAEETRVRQRYVDLILRPQARDVVRTRASV
VRSLRDSFHRRGFTEVETPMLQTLHGGASARPFVTHSNAFDIDLYLRIAPELFLKRCVVG
GIEKVFEINRNFRNEGSDSSHSPEFAMLEYYEAYATYDTNAVMTRELIQEAAQAVFGGLE
VTLADGSLYDLSGEWTSLSMYDSLSHALGEEVTPETSVEKLRGFASARGMEVDPKLGHGK
LVEELWEHLVGDHLHEPTFVRDFPIETSPLTRQHRTKPGVAEKWDLYVRGFELATGYSEL
VDPVIERERLLDQARQAAAGDSEAMRLDEDFLRALEYGMPPSGGVGMGIDRLLMALTGLG
IRETILFPLVRPE
NT seq 1482 nt   +upstreamnt  +downstreamnt
gtgcccgctgacgacctgcccgaacaaatgcgggtccgtcgggccaagcgcgatcggctg
ctcgcggagggcgtggagccgtacccggtcgaagtgccgcgtacccacacgctcgcccag
gtgcgcgcggcgcacccggacctgcccgccgacacggccaccggcgaggtcgtcggcgtg
accggtcgcgtcatgttctcccgcatcggcggcaagctgtgcttcgcgacgctgcgcgaa
ggcgacggcaccgaactgcaggcgatgatcagcctcgcgaacgtcggcgaggaagcgctg
gccgcctggaaggcggacgtcgacctcggcgaccacgtctacgtgcacggcgaggtcatc
acgtccaagcgcggtgagctgtccatcatggccgacgagtggcggatggccgcgaaggcg
ctgcgcccgctgccggtcgcgcacaaggagctggccgaggagacccgcgtccgccagcgc
tacgtcgacctgatcctgcgcccgcaggcccgcgacgtggtgcgcactcgcgcgtcggtg
gtccgttcgctgcgggattcgttccaccgccggggtttcaccgaggtggaaacgccgatg
ctgcagaccctgcacggcggcgcctcggcccggccgttcgtcacccattcgaacgcgttc
gacatcgatctgtacctgcggatcgcgccggagctgttcctcaagcggtgtgtggtcggc
gggatcgagaaggtcttcgagatcaaccgcaacttccgcaacgagggcagcgactcctcg
cattcgccggaattcgcgatgctggagtactacgaggcctacgccacctacgacacgaac
gcggtgatgacccgggagctgatccaggaagcggcgcaggccgttttcggcggcctcgag
gtcacgctcgccgacggctcgctgtacgacctctccggcgaatggacgtcgctgagcatg
tacgactcgttgtcccacgcgctgggcgaggaagtgacgccggaaacgtcggtggagaag
ctgcgcgggttcgcctccgcgcgcggcatggaggtcgatccgaaactcggccacggcaag
ctggtcgaggaactgtgggagcacctcgtcggtgatcacctgcacgagccgactttcgta
cgggattttccgatcgagacctcgccgctgacccggcagcaccggaccaagcccggcgtg
gccgagaagtgggacctctacgtccgcggattcgagttggccaccggatactccgagctg
gtcgacccggtgatcgagcgggaaagattgctggaccaggcccgccaggccgcggccggg
gatagcgaagcgatgcgcctcgacgaggatttcctgcgcgcgctcgagtacggaatgcca
ccgagtggtggcgtgggaatgggcatcgatcgtctcctgatggccctcacaggcctcggc
atccgcgagaccatcctcttcccgctggtgcgccccgaatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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