KEGG   Alkaliphilus metalliredigens: Amet_0093
Entry
Amet_0093         CDS       T00551                                 
Name
(GenBank) polynucleotide adenylyltransferase/metal dependent phosphohydrolase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
amt  Alkaliphilus metalliredigens
Pathway
amt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:amt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Amet_0093
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amt03019]
    Amet_0093
Enzymes [BR:amt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     Amet_0093
Messenger RNA biogenesis [BR:amt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     Amet_0093
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2
Other DBs
NCBI-ProteinID: ABR46336
UniProt: A6TJG8
Position
110289..111707
AA seq 472 aa
MNKIIACILETGKVSNIDIYLVGGSIRDFLLNRNIKDLDLIIKEDPGRFAEKIAKELQGS
YFVLDQDRGIHRVKVKDGITIDLAKFQGEDILADLAKRDYTINAMAYPLESGWPIDESQL
IDPYGGQQDIKEKVIRQISEKNFQQDPIRMLRGPRLMGQLDFEMDDETKKSIQRNCLLIN
EAPGERIATEIFTLLGEENTHEYLEFLDKELHVLDKIFPEIINMKDVGQCKYHVVDCWTH
SLYTMRIAEMVIYHQGFFENHIREAYEVHTSKKVAGEHTRLQLIKLGALFHDIGKPSAQK
VDETGRVRFRGHEITGAEIVKVYGEKLKLSVKEQQMLYRYIELHMGPLVLYKSNDVSGKA
LYKLFKEMGEETLDILLIAFADIVATRKLLDPEEEMGMFKIHIEYIANNYITRYKPIENI
SHIISGKEIMETLNLPEGILVGEIVEEVKKAIYFGKIPPEKERVLKYIKEIY
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgaataaaatcattgcctgtattcttgaaacaggtaaagtttccaatatagatatttac
ttagtaggaggtagtatcagagactttttactcaatagaaatataaaagatttagacctt
atcataaaagaggatccaggacgcttcgctgaaaagatagcaaaggaactacaagggagt
tattttgttctagatcaggaccgtggaattcatcgggtaaaagtaaaggatgggataacc
atcgatttagctaaattccaaggtgaagatatattagcagatttggcaaagagggattac
acaattaatgccatggcctatcctcttgaaagtgggtggccaattgatgaaagtcaatta
attgatccttatggtggacaacaagatattaaagaaaaggtcataagacaaatttcagag
aagaattttcaacaggaccccattagaatgctcagaggtccgcgtttgatggggcaactg
gactttgaaatggacgatgagactaagaaaagcatacaaagaaattgtctgcttattaat
gaagccccaggagaacggattgctacggaaattttcactttactaggagaagaaaataca
catgagtatttagaattcttagataaagaacttcatgtattggataaaatctttcctgaa
attatcaatatgaaggatgtggggcaatgcaaatatcacgtggtagattgttggacccac
tctttgtataccatgaggattgctgagatggtaatctatcaccaaggtttttttgaaaac
catataagagaagcctatgaagtccataccagcaaaaaggttgccggagagcatacacga
ctacagctcattaaattaggagcactattccacgacatcggaaagccatcagcacagaag
gtagatgaaacaggaagagtccgttttaggggacatgagattaccggagcagagattgtc
aaagtctatggagaaaagctaaagctcagcgtgaaggaacagcaaatgctttatcgctac
attgagctgcatatgggaccattggtactatataaaagcaatgatgttagtggaaaggca
ctttataagctctttaaagagatgggtgaagaaaccctagatattctattaattgccttt
gctgatattgtagcaacaaggaagctattggatcccgaagaagaaatgggcatgttcaaa
atacatatcgaatacattgcaaacaattatataacccgttataaaccaattgaaaacatt
tcccacattatatctggaaaagaaattatggagacattgaaccttccagaagggatttta
gtaggagagatagtagaggaagtgaaaaaggccatttactttggtaaaattcctcctgaa
aaggaaagagtgctaaaatatattaaagaaatatactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system