KEGG   Amycolatopsis sp. AA4: CU254_05670
Entry
CU254_05670       CDS       T05278                                 
Symbol
speD
Name
(GenBank) adenosylmethionine decarboxylase
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
amyc  Amycolatopsis sp. AA4
Pathway
amyc00330  Arginine and proline metabolism
amyc00480  Glutathione metabolism
amyc01100  Metabolic pathways
amyc01110  Biosynthesis of secondary metabolites
amyc04148  Efferocytosis
Module
amyc_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:amyc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    CU254_05670 (speD)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    CU254_05670 (speD)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    CU254_05670 (speD)
Enzymes [BR:amyc01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     CU254_05670 (speD)
SSDB
Motif
Pfam: Orn_Arg_deC_N AdoMet_dc Orn_DAP_Arg_deC
Other DBs
NCBI-ProteinID: ATY10007
UniProt: A0A2K8LNJ3
Position
1159125..1160621
AA seq 498 aa
MERCQAFLEERQPPTPCLVVDLDVVRGSCARLRAVLPEARMYYAVKANPAPEVVRVVRQA
GAGFDVAGREEIELCLAQGVRPESLSYGNPVKKARDIEFAHRVGVRRFTFDSREDLEKLA
EFAPGATVSCRILVDSPGALTPFGRKFGCDPAMAAELLVRAAELGLDPEGIAFHVGSQHV
DPRAWEAGIAAAGEVTRAVAQRGVSLRGLNIGGGFPVGYLTEPPSLEEYAAVIRDAVGRH
FAVAPELSFEPGRAVVASAGVIRSEVVLVSRKSAADEKRWVYLDIGRYGGLAETENEAIA
YRLVTAHDGGPDGPVVVAGPTCDGDDVLYQRTPYRLPLALRAGDYVDIPHAGAYTQSYSS
VSFNGFPPLRAYFIGGESAGVGEFAGRHVLAEFSGVAAELLDDPAFLCESLERALDKAGA
TVCELTYKQFEPHGVTAMALLSESHASIHTYPERGSAFVDVFTCGRKADPELAVHLLRDL
LGASVSRVTTIHRGQEDS
NT seq 1497 nt   +upstreamnt  +downstreamnt
ttggagcgctgccaggcgttcctggaggaacggcagccgccgacgccgtgtctcgtcgtg
gatcttgacgtcgtgcgcggaagctgcgcgcggctccgcgcggtgctgccggaagcgcgg
atgtactacgcggtcaaggccaatccggcgcccgaggtcgtgcgggtggttcggcaagcc
ggggcggggtttgacgtcgcggggcgcgaggagatcgaattgtgtctcgcgcaaggggtg
cggccggagtcgctgtcttatggcaacccggtgaagaaagcgcgggacatcgaattcgcg
catcgcgtcggggtgcggcggtttacctttgacagccgggaggatctggagaagctcgcc
gagttcgcgccgggggcgacggtttcatgccggattctggtggacagtcctggggcgttg
acgccgttcgggcggaagttcgggtgtgatcccgcgatggcggccgagttgctggttcgg
gctgccgagctggggctggatccggaagggatcgcgtttcacgtggggtcgcagcatgtc
gatccgcgggcttgggaggccgggatcgctgctgcgggcgaggtgactcgtgcggtggcg
cagcgcggggtttccttgcgtggcttgaacatcggcggcggatttccggttggctatctg
actgagccgccgtcgttggaggaatacgcggcggtcattcgcgacgcggtggggcggcat
ttcgcggtggcccctgagctgtcgttcgagccggggcgggctgtggtggcctcggcgggg
gtgattcgcagcgaggtcgtgctggtttcgcgcaagtccgcggcggacgagaagcgttgg
gtgtatctcgacatcggccggtacggcgggcttgccgagacggagaacgaggcgatcgcg
taccggttggttaccgcgcatgacgggggtccggacgggcccgttgtggttgcggggccg
acctgcgacggggacgacgtgctttatcagcgcacgccgtatcggttgccgttggcgttg
cgggcgggggattacgtcgatattccgcacgcaggggcgtacacgcaaagttactcttcg
gtgtcgttcaacggttttccgccgttgcgggcgtacttcatcggcggggaatccgctggc
gtaggggaattcgccggacggcatgtgctggctgagttttccggggtggccgcggagttg
ctcgacgatccggcgttcttgtgcgagagcttggaacgcgcgctggacaaggccggtgcg
acggtgtgcgagctgacgtacaagcagttcgagccgcacggtgtgacggcgatggcgttg
ctgtcggagtcgcacgcttcgattcacacgtatccggagcgcgggtcggcattcgtggac
gtgttcacgtgcgggcgcaaggcggatccggagctggcggttcacttgctgcgggacttg
ctcggcgcgagcgtttcgcgggtcaccactatccaccgaggacaggaagacagttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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