KEGG T05278: CU254

Amycolatopsis sp. AA4: CU254_24930

Entry

CU254_24930       CDS       T05278

Name

(GenBank) tRNA pseudouridine(55) synthase TruB

K03177

tRNA pseudouridine55 synthase [EC:5.4.99.25]

Organism

amyc Amycolatopsis sp. AA4

Brite

KEGG Orthology (KO) [BR:amyc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:amyc03016]
    CU254_24930
Enzymes [BR:amyc01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     CU254_24930
Transfer RNA biogenesis [BR:amyc03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    CU254_24930
Prokaryotic type
    CU254_24930

SSDB

Motif

Pfam:

TruB_N TruB_C TruB_C_2 PseudoU_synth_2 ADH_zinc_N LPP DKCLD

Other DBs

NCBI-ProteinID:

ATY13318

UniProt:

A0A2K8M0T4

Position

complement(5382089..5383006)

AA seq 305 aa
MSRPKEPRRPAPPPGLLIVDKPAGMTSHDVVARARRIMGTRKVGHAGTLDPMATGVLVLG
IERATKLLGHLALDRKTYLATLSLGRSTTTDDAEGEPLENDAAPETLAAVTDEQIADGVA
QLTGDIQQVPSAVSAVKIDGKRAYARVRAGEDVVLPPRPVTVHRFDVLGLRREDDRIELD
AVVECSSGTYVRALARDLGAGLGVGGHLKALRRTTVGPFTLARARTLDQLEEKPELSLDL
DAAVAAAFPRRDLDAATAKAVQYGRRIPAAGIAGTYGLFAPDGHVLALASDAEGVTRSVV
VLLPA

NT seq 918 nt +upstreamnt +downstreamnt
gtgtctcgcccgaaagaaccgcgtcgtcccgcccctcctcccggactgctcatcgtcgac
aaaccggcgggcatgacgtcgcacgacgtggtcgcgcgggcgcggcggatcatgggcacc
cgcaaggtcggccacgccggcacgctcgacccgatggcgaccggcgtgctcgtgctcggc
atcgaacgcgccaccaaactcctcgggcacctcgccctcgaccgcaagacctacctcgcc
accctgtcgctcggccggtccaccaccaccgacgacgccgagggcgaaccgctcgaaaac
gatgccgcgccggaaaccctcgccgcggtcaccgacgagcagatcgccgacggcgtcgcg
cagctgaccggtgacatccagcaggtgcccagcgcggtctccgcggtcaagatcgacggc
aagcgcgcctacgcccgggtgcgcgcgggcgaggacgtcgtcctcccgccgcggccggtg
accgtgcaccggttcgacgttctcggccttcgccgcgaggacgaccggatcgaactcgac
gcggtcgtcgaatgctcgtccggcacctacgtccgcgcgctcgcccgcgatctcggcgcg
ggactcggcgtcggcgggcacctgaaagccttgcgccgcaccacagtcgggccgttcacg
ctcgcccgcgcgcgcacgctcgaccagctcgaagaaaagcccgaactgtccctggacctc
gacgccgccgtcgccgctgcgttcccgcgccgggatctcgacgccgccaccgccaaggcc
gtgcagtacggcaggcgcatccccgccgcgggaatcgccggcacgtacggcctgttcgcg
ccggacggccacgtgctcgcgctggcctcggacgccgagggagtgacccgctcggtggtg
gtcctcctgcccgcatag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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