KEGG   Amycolatopsis mediterranei RB: B737_2368
Entry
B737_2368         CDS       T02804                                 
Symbol
nrdA
Name
(GenBank) ribonucleoside-diphosphate reductase alpha chain
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
amz  Amycolatopsis mediterranei RB
Pathway
amz00230  Purine metabolism
amz00240  Pyrimidine metabolism
amz01100  Metabolic pathways
amz01232  Nucleotide metabolism
Module
amz_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
amz_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:amz00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    B737_2368 (nrdA)
   00240 Pyrimidine metabolism
    B737_2368 (nrdA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amz03400]
    B737_2368 (nrdA)
Enzymes [BR:amz01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     B737_2368 (nrdA)
DNA repair and recombination proteins [BR:amz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    B737_2368 (nrdA)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N Ribonuc_red_lgN MqsR_toxin
Other DBs
NCBI-ProteinID: AGT83032
Position
2561382..2564195
AA seq 937 aa
MTETVGTGARAAAGKKGKTAGGLSVQRVFTTEGQHPYDQVTWEQRDVVMTNWRDGSVNFE
QRGVEFPDFWSVNATNIVTSKYFRGAVGSPQRERSLKQLIDRVVHTYVKAARDHGYFAAP
QDLEIFEHELTWMLLHQVFSFNSPVWFNVGTPSKQQVSACFILAVDDTMESILNWYREEG
LIFKGGSGAGLNLSRIRSSKELLTSGGTASGPVSFMRGADASAGTIKSGGATRRAAKMVV
LDVDHPDIEEFIQTKAREEKKIKVLRDAGFDMDLSGADISSVQYQNANNSVRVTDEFMQA
VENGTEFGLRARLTGEVIDRTDAKKLFRTMAQAAWECADPGIQYDGTINDWHTCPESGRI
TASNPCSEYMHLDNSSCNLASLNLLKFVTPEGTFDAPLFARAVEFVITAMDVSICFADFP
TEPIADTTRKFRQLGIGYANLGALLMALGHAYDSEGGRALAAAITSLMTGVSYRRSAEMA
RVVGAYEGYARNAEAHQRVMRKHAAANELVRTYHSNDAAVRALATEEWQKGIEIGAKHGW
RNAQASVLAPTGTIGFMMDCDTTGIEPDFSLVKFKKLVGGGSMQIVNQTVPRALEALGYL
TEQVEAIVEYVAQNGHVVDAPGLRPEHYEVFDCAVGERSIAPMGHVRMMAAVQPFLSGAI
SKTVNMPESATVEEVEEIYFQGWKLGLKALAIYRDNCKVGQPLSTAKKESAAAEPEKVVE
YRPVRKRLPKKRPSQTVSFTVGGAEGYLTAGSYPDDGLGEIFVKLGKQGSTLAGVMDAFS
MSISVGLQHGIPLEFYVSKFCNLRFEPAGMTDDPDIRIATSVMDYLFRRLALDYLPYEKR
SQLGILSADERSAEVEATYGNPGVDLEALQSTVDASPEPHADEPEHPHREARTTTELMEL
RLGKAADAPLCMTCGTKMRPAGSCYACEGCGATSGCS
NT seq 2814 nt   +upstreamnt  +downstreamnt
atgacggaaaccgtgggaacgggggcccgcgcggccgccggcaagaagggcaagaccgcc
ggcgggctgagcgttcagcgcgtcttcaccaccgagggccagcacccctacgaccaggtg
acctgggagcagcgggacgtcgtcatgacgaactggcgcgacggctcggtcaacttcgaa
cagcgcggcgtggagttccccgatttctggtcggtcaacgccaccaacatcgtcaccagc
aagtacttccgcggcgccgtcggcagcccgcagcgcgaacgcagcctcaagcagctcatc
gaccgggtcgtgcacacctacgtcaaggccgcgcgcgaccacggctacttcgccgcgccg
caggacctcgagatcttcgagcacgagctcacctggatgctgctgcaccaggtcttcagc
ttcaactccccggtctggttcaacgtcggcacgccgtcgaagcagcaggtcagcgcctgc
ttcatcctcgcggtcgacgacacgatggagtcgatcctcaactggtaccgcgaagagggc
ctgatcttcaagggcggctccggcgccgggctgaacctctcccgcatccgctcctcgaag
gagctgctcacctccggcggcaccgcgtccgggccggtctcgttcatgcgcggcgccgac
gcgtccgcgggcaccatcaagtccggcggcgccacccggcgcgcggcgaagatggtcgtg
ctcgacgtcgaccacccggacatcgaggagttcatccagaccaaggcgcgcgaagagaag
aagatcaaggtcctccgcgacgccgggttcgacatggacctctccggcgcggacatctcc
tccgtccagtaccagaacgcgaacaactcggtccgcgtgaccgacgagttcatgcaggcg
gtcgagaacggcaccgaattcggcctgcgcgcccggctcaccggcgaggtcatcgaccgc
accgacgcgaagaagctgttccgcacgatggcccaggccgcctgggagtgcgccgacccc
ggcatccagtacgacggcacgatcaacgactggcacacctgcccggagtcgggccggatc
accgcgtcgaacccgtgcagcgagtacatgcacctcgacaactccagctgcaacctggcg
tcgctgaacctgctgaagttcgtcacccccgagggcaccttcgacgcgccgctgttcgcc
cgcgccgtcgagttcgtcatcacggcgatggacgtctcgatctgcttcgcggacttcccg
accgagccgatcgccgacaccacgcggaagttccgccagctcggcatcggctacgccaac
ctcggcgcgctgctgatggcgctgggtcacgcgtacgactccgaaggcggccgcgcgctc
gcggcggcgatcacgtcgctgatgacgggcgtgtcctaccggcgttcggcggagatggcc
cgggtcgtcggcgcgtacgagggctacgcgcgcaacgccgaagcgcaccagcgcgtgatg
cgcaagcacgcggcggcgaacgagctcgtccgcacctaccactccaacgacgccgcggtc
cgcgcgctggcgacggaggagtggcagaagggcatcgaaatcggcgcgaagcacggctgg
cgcaacgcgcaggcgtcggtgctcgcccccaccggcaccatcggcttcatgatggactgc
gacaccaccgggatcgagccggacttctcgctggtgaagttcaagaagctcgtcggcggc
ggctcgatgcagatcgtcaaccagacggtgccgcgcgcgctggaggcgctgggctacctg
accgagcaggtcgaggcgatcgtcgagtacgtggcgcagaacggccacgtcgtcgacgcg
ccggggctgcggcccgagcactacgaggtgttcgactgcgcggtcggcgagcgctcgatc
gcgccgatggggcacgtccggatgatggccgcggtgcagccgttcctgtccggcgccatc
tccaagacggtcaacatgccggagtcggcgacggtcgaagaggtcgaggagatctacttc
cagggctggaagctcggcctgaaggccctcgccatctaccgcgacaactgcaaggtcggc
cagccgctgtcgacggcgaagaaggaatcggcggcggccgaaccggagaaggtcgtcgag
taccgcccggtgcgcaagcgcctgccgaagaagcgcccgagccagacggtgtcgttcacc
gtcggcggcgcggagggctacctgacggcgggctcgtacccggacgacggcctcggcgag
atcttcgtcaagctcggcaagcagggctcgacgctggccggcgtgatggacgcgttctcg
atgtcgatctcggtcggcctccagcacggcatcccgctcgagttctacgtctccaagttc
tgcaacctccgcttcgagccggcgggcatgacggacgacccggacatccgcatcgcgacc
agcgtgatggactacctgttccgccgcctggccctggactacctgccgtacgagaagcgc
tcccagctgggcatcctctcggcggacgagcggtcggccgaagtcgaggcgacgtacggc
aaccccggcgtcgacctggaggccctgcagtccacagtggacgcctcaccggagccgcac
gcggacgaaccggagcacccccaccgcgaagcccggacgacgacggagctgatggagctc
cgcctcggcaaggcggcggacgccccgctctgcatgacgtgcggaacgaagatgcgcccg
gccggctcctgctacgcgtgcgaaggctgcggcgccacgtccggctgcagctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

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