KEGG   Nostoc sp. PCC 7120: all1989
Entry
all1989           CDS       T00069                                 
Symbol
recJ
Name
(GenBank) single-strand-DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ana  Nostoc sp. PCC 7120
Pathway
ana03410  Base excision repair
ana03430  Mismatch repair
ana03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ana00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    all1989 (recJ)
   03430 Mismatch repair
    all1989 (recJ)
   03440 Homologous recombination
    all1989 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ana03400]
    all1989 (recJ)
DNA repair and recombination proteins [BR:ana03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     all1989 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     all1989 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      all1989 (recJ)
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB SseB_C
Other DBs
NCBI-ProteinID: BAB73688
CyanoBase: all1989
UniProt: Q8YVI9
Position
complement(2383665..2386004)
AA seq 779 aa
MQWIITATEQPPEWFIQAVKKYVSASKGIYAAQLLWQRGVKEESQLAAFINFKNYQPASA
FEFAQEMQLAVARLQQARNKGEKITIWGDFDADGITSTAVLWDGLGQFFQQHQQLNYYIP
NRLKESHGLNESGIANLAKQGCTLIVTCDTGSTNIDEIIYAQKLGIDVIVTDHHTLPTER
PPVTAIINPRYLPNEHQLFHLSGVGVAYKLIEALYKSLPDVPQNPLEDLLDLVAVGLIAD
LVQLSGDCRYLAQLGIQRLQTDFQQPPAARRRPGVGRLLELCQRNGDRPTDISFGLGPRI
NAVSRIQGDASFCVELLTSRDINRCHQLAEVTELANTRRKSLQKDVQAQVTQKLTQLDLS
TTSVIVLEDPQWPAGVLGLVAGQVAQETGRPTILLSTEGLGNEEDSSPSPIPNLQLLARG
SARSVNSVDLYQLVKHQAHLLHRFGGHPFAAGLSLLAENIPLFTQAINQQLRQTLGSVNL
TPAVQADIVVTVADLGKELFLELKLLEPCGMGNPVPKLLIQNCWFENAWHRNQQDWQGKK
VQYIKAEFDIRDDSSKNPFPGIWWGHYKDELPIGRCDCIAELDYNTFKKRYEIRLIALRP
NPNSELKTQHSTQILDWRNLPNPQYPVPNPQSLILEECPMNWDDLRAWWRRSLYNNQQLV
LAWSKPNLQPPQEIWLTLVGIAKYLSRTNQLATRTQILEKLKISDRSLLLGIKALKYWGF
TVTRQDRSLQFIWSSNSVVESNADAAIAEFLATISEEQFQQKYFAEVPLSTIVAMVNRV
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgcagtggattataacagcaactgaacagccaccagaatggtttattcaagcagtgaaa
aagtatgtatctgcatctaaagggatatatgcagcacaattactatggcaacggggagta
aaagaagaatcacaattagcagcctttattaactttaaaaattatcaaccagccagcgcc
tttgagtttgctcaagagatgcagttggcagtggcaagattacaacaggcacgcaacaaa
ggtgaaaaaattaccatttggggagactttgacgctgatggaattacttcgactgctgtt
ttgtgggatggtttaggtcaattttttcagcaacatcaacagttgaattattacattcct
aatcgactcaaagaatcccacggattgaatgaatctggtatcgctaatttagccaaacaa
ggctgtacattaatcgtcacctgcgacacaggtagtacaaatattgatgaaattatctat
gcccaaaaattaggtatagatgtcatagttacagaccatcacaccttacctacagaacgt
ccaccagtcacagcaattattaatccccgttatttacccaacgaacatcagctatttcat
ttatcgggcgtgggagtagcttataaattaatagaagccctttataaatccttacctgat
gtaccccaaaatcctttagaagatttactcgatttagttgcagtcggattaatcgctgat
ttggtgcaacttagtggtgattgtcgttatttagcacagttgggtattcagagactgcaa
actgattttcaacaaccaccagccgccaggcgtagaccaggagtagggcgattattagaa
ttgtgccaaaggaatggcgatcgccccacagatatttcttttggtttaggaccacgcatt
aacgccgttagccgcattcaaggcgatgctagtttctgcgtagaacttttaaccagtcgt
gatatcaatcgctgtcatcaattagccgaagtcacagaactagcaaacaccaggcgcaaa
tctttacagaaagatgtacaagcacaagtcacccaaaaactcactcagttagacttatcc
accaccagcgtcattgtccttgaagacccccaatggccagcaggcgtattaggcttagtc
gctggacaagtcgcccaagaaacaggtcgccccactatcttgttaagtactgagggactg
ggcaatgaggaggattcttccccatctccaatccctaatctccaactcctcgctcgtggt
tccgcccgttcagtgaattccgtcgatttataccaattggtgaaacaccaagcacatcta
ttacatcgctttggcggtcatccttttgctgctgggttgagtttgttagccgaaaacatc
cctctctttacccaagcaattaatcagcaactacggcaaaccttgggtagtgtcaatctc
accccagcagtacaagcagatatagtagtcacagttgcagacttaggtaaagagctattt
ttagaattaaaactgctagaaccttgcggtatgggcaaccccgttcccaaactcttgatt
caaaattgctggtttgaaaatgcttggcatcgcaatcaacaagattggcaaggtaaaaaa
gtacaatatattaaagccgaatttgatatccgtgacgactccagcaaaaatccctttccc
ggtatttggtggggacattacaaagatgaattacccataggtagatgtgattgcatagcg
gaattagactacaacaccttcaaaaaacgctacgaaatcagattaatcgccctccgtccc
aatcccaactcagaactcaaaacccaacactcaactcaaattcttgactggcgcaacctc
cccaatccccaatacccagtacccaatccccagtccctcatcctagaagaatgccccatg
aattgggatgatttacgcgcctggtggcggcgatcgctctacaataatcaacaattagtc
cttgcttggtctaaacccaatctgcaaccaccgcaagaaatttggttgaccctagttggt
attgccaaatatctcagtcgaacaaatcaattagccacccgcacacaaattttagaaaaa
ctgaaaattagcgacagaagcttacttttaggcatcaaagctttaaaatattggggattt
acagtcacaagacaagaccggtctttgcaattcatctggagttctaatagtgtagttgaa
agcaatgccgacgctgctattgcagaatttttagcaaccatcagcgaagaacaatttcag
cagaaatattttgcagaagtacctttgtctactattgtggcaatggttaacagggtttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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