KEGG   Arcobacter nitrofigilis: Arnit_0894
Entry
Arnit_0894        CDS       T01235                                 
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
ant  Arcobacter nitrofigilis
Pathway
ant03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ant00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Arnit_0894
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ant03400]
    Arnit_0894
DNA repair and recombination proteins [BR:ant03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Arnit_0894
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Arnit_0894
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD Kinesin SWI2_SNF2 Microtub_bd AAA_30 DUF87 AAA_22
Other DBs
NCBI-ProteinID: ADG92558
UniProt: D5V2X6
Position
890390..892363
AA seq 657 aa
MAEFKVESKYSPAGDQPQAIEKLSESILAGNQYNTLLGVTGSGKTYTMAKVIEKTQKPTL
IMTHNKTLAAQLYSEFKSFFPNNHVEYFISYYDYYQPEAYIPRSDLFIEKDSSINSELER
MRLSATASLLSFDDVIVVASVSANYGLGNPAEYKSMVQKLSVGFEYSQRTLLMKLVDMGY
KRNDKFFDRADFRVNGDVIDVFPAYWQDEFIRIEFFADEVESISIHEYMTNVKQKDVQDV
TIYSVNPFVVNSENLATAVKKIEEELEDRLAFLKAEDRLVEYQRLKQRVEFDLEMIEGTG
MCKGIENYARHLTGLEPGETPYSMMDYFEQIGKDFLLIVDESHVSLPQFRGMHAADKSRK
EVLVEYGFRLPSALDNRPLMFDEFINKAPHYLFVSATPNELETSMSSVVAEQIIRPTGLL
DPTIEIMDSEFQVEKLHDEIKKVAAKNERVLVTVLTKKMAEELTAYYLDLGIRVKYMHSE
IDTLERVEIIRQLRLGEFDVLVGINLLREGLDIPETSLVAILDADKEGFLRSKTSLIQTM
GRGARNQNGRVILFAKRVTDSMQFAIDVTNKRREVQEAHNKKHGITPTSTTRVLEDNLKL
EEYDAVALKLEKLDKMPAAERKKMLIELNKAMTKASKDLNFEEAIRLRDEIEKIKKL
NT seq 1974 nt   +upstreamnt  +downstreamnt
atagcagagtttaaagttgaaagtaaatatagcccagctggagatcaaccccaagcaata
gaaaaattaagtgaatcaatacttgcaggtaatcaatataatacactgcttggagtaaca
ggttcaggtaaaacttatactatggcaaaagttattgagaaaactcaaaaaccaacttta
ataatgactcataataaaactttggctgcccaactatacagtgaatttaaatcttttttc
cctaacaatcatgtggaatattttatctcttattatgattattatcaaccagaagcttat
attccaagaagtgatttgtttatagaaaaagacagttctataaactcagaacttgaaaga
atgagattaagtgcaacagcttctttactctcttttgatgatgttattgtagtagcttct
gtctctgcaaactatggtttaggaaatcctgctgaatataaatctatggtacaaaaacta
tctgtgggatttgaatactcacaacgtacgcttttaatgaaacttgtggacatgggttat
aaaagaaatgacaagttttttgaccgagctgattttagagtaaacggggatgttattgat
gtctttcctgcttattggcaagatgaatttattcgcatagagttttttgcagatgaagtt
gaatcaatttctattcatgaatacatgactaatgtaaaacaaaaagatgtacaagatgta
actatttattctgtaaatccttttgttgtaaatagtgaaaacctagcaacagctgtaaaa
aaaattgaagaagagttagaagatagattggcctttttaaaggctgaagatagacttgta
gagtatcaaagactaaaacagagagtagagttcgatttagagatgattgaaggtactggt
atgtgtaaaggaatagaaaactatgctcgacacttgacaggacttgaacctggtgaaaca
ccttactctatgatggattattttgaacaaataggaaaagactttttacttatagttgat
gaatctcacgtatcattaccccaatttagaggaatgcacgccgcagataaaagtagaaaa
gaagttcttgttgagtatggatttagattaccaagtgctttagataaccgtcctttgatg
tttgatgaatttatcaataaagccccacattatctgtttgtaagtgcaacaccaaatgaa
ctagaaacttcaatgagttcagttgtagctgagcaaattattagaccaactggattgtta
gacccaactattgagattatggatagtgaatttcaagttgaaaaattacatgatgaaatc
aaaaaagttgctgcaaaaaatgagcgggttttagttacagttttaactaaaaaaatggca
gaagaactaacagcatattatttagacttaggtataagagtaaaatatatgcatagtgag
atagatactttggaacgagtagaaatcattcgtcaattgcgattgggtgaattcgatgtt
ctagttggaatcaatcttttaagggaaggtttagatatcccagaaacttctttggtagct
attttggatgcagataaagaaggatttttaagaagtaaaacttctcttatccaaacaatg
ggaagaggggcaagaaatcaaaatggacgggttattttatttgctaaaagagtaactgat
tctatgcagtttgccatagatgtgacaaataaaagaagagaagttcaagaagcacacaat
aaaaagcatggcatcacaccaactagtaccacaagagtattagaagataacctaaaactt
gaagagtacgatgctgtagccttgaagttagagaagttagacaaaatgccagcagctgag
agaaagaagatgctcatagagctaaataaggcgatgacaaaagcttcaaaagacttgaac
ttcgaagaagcgataaggctccgtgacgaaatagaaaaaatcaaaaaattgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (20)   

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