KEGG   Asparagus officinalis (garden asparagus): 109838512
Entry
109838512         CDS       T05243                                 
Name
(RefSeq) transcription factor-like protein DPB
  KO
K04683  transcription factor Dp-1
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    109838512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:aof03000]
    109838512
   03036 Chromosome and associated proteins [BR:aof03036]
    109838512
Transcription factors [BR:aof03000]
 Eukaryotic type
  Helix-turn-helix
   Fork head/winged helix cell cycle-controlling factors, DP
    109838512
Chromosome and associated proteins [BR:aof03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     109838512
SSDB
Motif
Pfam: DP E2F_TDP CENP-F_leu_zip
Other DBs
NCBI-GeneID: 109838512
NCBI-ProteinID: XP_020262536
Position
4:36038649..36052335
AA seq 314 aa
MVTGSSDHQKQQKQRDDAPASDSTFIRMNQLDIHGDDAGSSQAAAEEGNKKKKRGTRAVA
GDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPGNNIGPPDQQQYDEKNIRR
RVYDALNVLMAMDIISKDKKEIQWRGLPRTSLNDVEELKAERVALKSRIDKKAAYLQELE
DQYIGLQNLVNRNEQLHGDNPPGGVALPFILVQTRPHATIEVEISEDMQLVHFDFNSTPF
ELHDDSYVLRAMRLSEQEHNDGDHEPHSIICDSSSTQGLFSPPRPLIRPNSQGKVPSSPQ
IPGILKARAFKPEH
NT seq 945 nt   +upstreamnt  +downstreamnt
atggtcactggatcaagcgatcatcagaagcagcagaagcagagggatgacgctccggcg
agcgacagcactttcatcaggatgaatcagctcgatatccatggcgatgatgctggatct
tctcaagcggcggcggaggagggtaacaaaaagaaaaagaggggaacacgagctgttgct
ggcgataaaagtggcaggggccttcgacagttcagcatgaaagtctgcgagaaagttgaa
agcaaggggagaaccacttacaacgaggttgcagacgaacttgttgctgaatttgcagat
ccaggcaataatatagggcctccagatcagcaacagtatgatgagaaaaacataaggagg
agggtgtatgatgcactgaatgtgcttatggcaatggatatcatctcaaaggataaaaaa
gaaattcagtggaggggtttacctcgaactagcttaaatgacgttgaagaactgaaggca
gaacgtgttgctctgaagagtagaattgataagaaagcagcatatctgcaagaactggaa
gatcaatacataggccttcagaatttggtgaatcgtaatgagcaactacatggagataat
cccccaggtggagttgctttgcctttcatcctggttcagactcgaccacatgcaaccatt
gaggtggaaatatcagaagatatgcagctggtgcattttgactttaatagtactcctttt
gagttgcacgatgattcatatgttctgagggcaatgagactatctgaacaagaacacaat
gacggtgaccatgagcctcattcaattatttgcgacagctccagcacgcagggattattt
tcacctccaaggccacttataagacccaactcgcaaggaaaggtgcctagttcacctcag
attccaggaatactaaaagcccgagcgttcaagcctgaacactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system