KEGG   Asparagus officinalis (garden asparagus): 109839776
Entry
109839776         CDS       T05243                                 
Name
(RefSeq) SKP1-like protein 5
  KO
K03094  S-phase kinase-associated protein 1
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03083  Polycomb repressive complex
aof04120  Ubiquitin mediated proteolysis
aof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109839776
   04120 Ubiquitin mediated proteolysis
    109839776
  09126 Chromosome
   03083 Polycomb repressive complex
    109839776
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aof04131]
    109839776
   04121 Ubiquitin system [BR:aof04121]
    109839776
   03036 Chromosome and associated proteins [BR:aof03036]
    109839776
Membrane trafficking [BR:aof04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    109839776
Ubiquitin system [BR:aof04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     109839776
   Cul7 complex
     109839776
Chromosome and associated proteins [BR:aof03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     109839776
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     109839776
SSDB
Motif
Pfam: Skp1_POZ BTB
Other DBs
NCBI-GeneID: 109839776
NCBI-ProteinID: XP_020263868
Position
4:17931921..17932589
AA seq 190 aa
MASSHDSAMVITLRSFDGRGFNVDGRVAMMSSKVRCLIMPQICGPIFVPDCNGDAVEKII
EYCYKHADNNADEADLKSWDANFMQAFDKDSLDDILHAAKYLEIKELVDLTVLTRQNLED
LREEETIVKIGDLEDLREEETIAKINGDSENSREERELKGLGGCAIFCFAVLSLLMAGSG
FCYVYVKYVS
NT seq 573 nt   +upstreamnt  +downstreamnt
atggcttcttctcacgatagcgcaatggtgataactttgaggtccttcgatggtagaggg
ttcaacgtcgatggcagggtggctatgatgtccagtaaagtccgttgcttgatcatgccg
caaatctgtggcccgatctttgttccagattgcaacggcgacgcggtcgagaaaattata
gagtactgttataagcatgctgataacaatgccgacgaagctgatcttaaatcttgggat
gctaatttcatgcaggcgttcgataaagactctctcgacgacatccttcatgcggctaaa
tatctcgaaattaaagaattggtggatctaaccgttctaacccgtcaaaatttggaggat
ttgcgcgaggaggaaacgattgtaaagattggagatttggaggatttgcgcgaggaggaa
acaattgcaaagattaatggagattcagagaactcgcgcgaggaaagggaactaaaagga
cttggaggatgtgcgatattttgttttgcggttctttctttgctcatggcagggtctggt
ttttgttatgtttatgtgaagtatgttagctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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