KEGG   Amycolatopsis keratiniphila: AORI_2749
Entry
AORI_2749         CDS       T02678                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omegaDNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
aoi  Amycolatopsis keratiniphila
Pathway
aoi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:aoi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AORI_2749 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aoi03021]
    AORI_2749 (rpoZ)
   03400 DNA repair and recombination proteins [BR:aoi03400]
    AORI_2749 (rpoZ)
Enzymes [BR:aoi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     AORI_2749 (rpoZ)
Transcription machinery [BR:aoi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     AORI_2749 (rpoZ)
DNA repair and recombination proteins [BR:aoi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      AORI_2749 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AGM05336
UniProt: R4SYT5
Position
2924658..2924927
AA seq 89 aa
MTTQATLHEELEGITNPPIDDLLEKVSSKYALVIYSAKRARQINDYYAQLGEGLLEYVGP
LVEPGPREKPLSIALREIHGGLLEHTEGE
NT seq 270 nt   +upstreamnt  +downstreamnt
gtgacgactcaggccacgctgcacgaagagctcgaaggcatcaccaacccgcccatcgac
gacctcctcgagaaggtcagctcgaagtacgcgctggtgatctactcggccaagcgcgct
cgccagatcaacgactactacgcccagctgggcgagggtctcctggagtacgtcggcccg
ctggtcgagccgggcccgcgcgagaagccgctgtccatcgccctgcgcgagatccacggc
ggtctgctcgagcacaccgagggtgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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