KEGG   Actinobacillus pleuropneumoniae AP76 (serotype 7): APP7_0619
Entry
APP7_0619         CDS       T00717                                 
Symbol
deaD
Name
(GenBank) cold-shock DEAD box protein A-like protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
apa  Actinobacillus pleuropneumoniae AP76 (serotype 7)
Pathway
apa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:apa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    APP7_0619 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apa03019]
    APP7_0619 (deaD)
   03009 Ribosome biogenesis [BR:apa03009]
    APP7_0619 (deaD)
Enzymes [BR:apa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     APP7_0619 (deaD)
Messenger RNA biogenesis [BR:apa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     APP7_0619 (deaD)
Ribosome biogenesis [BR:apa03009]
 Prokaryotic type
  rRNA helicases
   APP7_0619 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 DRTGG
Other DBs
NCBI-ProteinID: ACE61271
UniProt: B3GXB9
Position
complement(680227..682086)
AA seq 619 aa
MTTNSLTFADLGLPQSILDAVNDMGFVTPSPIQQETIPHLLAGRDVLGMAQTGSGKTAAF
SLPLLAQIDPTKRHPQMLVMAPTRELAIQVADACEQFTKNMKGVNVVTVYGGQRYDIQLR
ALKQGSQVVVGTPGRILDHIRRGTLDLSALQSIVLDEADEMLRMGFIDDVETVMAELPEN
HQTALFSATMPEPIRRITRRFMQDPQEVKIQATQRSAPDITQSYWLVNGFRKNDALLRFL
EVEEFDAAIIFTRTKTGTIDITELCERNGYRTAALNGDMTQQAREQTLDKLKSGRLDILV
ATDVAARGIDIERISLVVNFDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLRNI
EHLMKKPIDEVAIPNHEILMAKRREKFKARVSKQLEHHDLEKYRELLEDLFTADQDHEEL
AAAMMMMLQEKQKLILPPDPEIRAARGERGRRDRDDRRGGRDERRGGREHRENNGVAMDL
YRIELGREDGVEVRHIVGAIANEGDISSRYIGHIKLHDTYSTIELPQGMPNHIVQHFAQK
ARVLNKQMQMSLLGPAGGVNSQPFEERRGGGRRNDRNDRNDRRSDRGGRSDRREGGFNDR
KKGGFKEKRFNDKGRGRRD
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgacaactaattctttaactttcgcagaccttggtcttcctcaatctattcttgatgct
gtaaacgacatggggtttgtgacgccttctcctattcaacaagaaacgattcctcattta
ttagccggccgtgacgtactcggtatggcacaaaccggtagcggtaaaacggcggcattc
tctttacctttattagcgcaaatcgatccgactaaacgtcatccgcaaatgttggtgatg
gcgccgacccgtgaactcgcgattcaagtcgcggatgcttgcgaacaatttactaaaaat
atgaaaggcgttaatgtggttaccgtttacggcggtcagcgttacgacattcaattacgt
gctttaaaacaaggctcacaagtggtggtcggtacgccggggcgtattcttgaccatatt
cgtcgcggtacgttagacctctctgcactacaatccatcgtattggatgaagcggacgaa
atgcttcgtatgggctttattgacgacgttgaaaccgtgatggcggaattaccggaaaat
caccaaacggcgttattctccgcaacgatgccggagccgattcgtcgtattactcgtcgc
tttatgcaagatccgcaagaagtcaaaattcaagcgacgcaacgttccgcaccggatatt
acccaaagttattggttagtaaacggcttccgtaaaaacgatgcgttattgcgtttctta
gaagtggaagaatttgatgcggcaatcatctttactcgtaccaaaaccggcacgattgat
attaccgaattatgcgagcgtaacggctatcgcacggcggcgttaaacggcgatatgacc
caacaagcgcgtgaacaaacgttagataaattaaaatcgggtcgtttagatattttagtg
gcgaccgacgttgccgctcgcggtatcgatatcgaacgcatcagccttgtagtaaacttt
gatattccgttagacgcagaatcttatgttcaccgtatcggtcgtaccggtcgtgcagga
cgttcggggcgtgccttattattcgtcgaaccgcgtgaacgccgtttactgcgtaacatc
gaacacttaatgaaaaaaccgatcgatgaagtggcgattcctaatcacgaaattctaatg
gcaaaacgtcgcgagaaattcaaagcgcgtgtttctaaacaattagagcatcacgattta
gaaaaataccgcgagttgcttgaagatttattcactgccgaccaagatcacgaagaattg
gcggcggcaatgatgatgatgcttcaagagaaacaaaaactcattcttccgccggatccg
gaaattcgtgcggcacgcggcgaacgcggtcgcagagatcgtgatgatcgtcgcggcgga
cgcgatgaacgccgtggcggtcgtgaacaccgtgagaataacggtgtagcaatggattta
tatcgtatcgaattaggccgtgaagacggtgtggaagtgcgtcatatcgttggcgctatc
gctaacgaaggcgatattagcagccgctatatcggtcatatcaaattacacgatacttat
tctacgattgaattaccgcagggtatgccgaatcatatcgtgcaacactttgcacaaaaa
gcgcgcgtactaaacaaacaaatgcaaatgtctttattaggccctgccggtggtgtaaac
agccaaccgtttgaagaacgtcgcggcggcggtcgtcgtaatgatagaaacgaccgcaat
gatcgtcgtagtgatcgcggcggacgttctgaccgtcgtgaaggcggctttaacgaccgt
aaaaaaggcggttttaaagaaaaacgttttaatgacaaaggtcgtggtcgtcgcgactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system