KEGG   Isoalcanivorax pacificus: S7S_15750
Entry
S7S_15750         CDS       T03580                                 
Name
(GenBank) Host factor Hfq
  KO
K03666  host factor-I protein
Organism
apac  Isoalcanivorax pacificus
Pathway
apac02024  Quorum sensing
apac03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:apac00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    S7S_15750
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    S7S_15750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apac03019]
    S7S_15750
   03036 Chromosome and associated proteins [BR:apac03036]
    S7S_15750
Messenger RNA biogenesis [BR:apac03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     S7S_15750
Chromosome and associated proteins [BR:apac03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    S7S_15750
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AJD49562
UniProt: A0A0B4XTC6
Position
complement(3536305..3536586)
AA seq 93 aa
MSKGHSLQDPFLNALRKERIPVSIFLVNGIKLQGQIESFDQYVVLLKNAVSQMVYKHAIS
TVVPARNPRASGPGGGNPAMGAPGPGDDFAGNA
NT seq 282 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcactcgctacaagacccttttctcaacgcgctgagaaaggaacgtatt
cctgtttccatcttcctggttaacggaatcaagctgcagggacagatcgaatctttcgac
cagtatgtggtgctgctgaagaacgcagtcagccagatggtctataagcatgcgatttca
acggttgtgccggcacgtaacccgcgtgcgtccggtccgggtggcggtaacccggccatg
ggtgctcctggcccaggcgatgactttgcaggcaatgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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