KEGG   Acetobacter pasteurianus 386B: APA386B_96
Entry
APA386B_96        CDS       T02786                                 
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
apk  Acetobacter pasteurianus 386B
Pathway
apk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:apk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    APA386B_96 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apk03019]
    APA386B_96 (recQ)
   03400 DNA repair and recombination proteins [BR:apk03400]
    APA386B_96 (recQ)
Enzymes [BR:apk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     APA386B_96 (recQ)
Messenger RNA biogenesis [BR:apk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     APA386B_96 (recQ)
DNA repair and recombination proteins [BR:apk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      APA386B_96 (recQ)
SSDB
Motif
Pfam: RQC DEAD HRDC Helicase_C RecQ_Zn_bind ResIII
Other DBs
NCBI-ProteinID: CCT58218
UniProt: S6D3C2
Position
complement(27927..29918)
AA seq 663 aa
MAWRVIISSRPHAHLPAAKACRLAPAAWRSNWPTPDRMIETGSISTPSQFSHSRLERDRF
AGKPPQEVLQAVFGFPGFRSLQAQAVECVMEGRDTLVLMPTGGGKSVCYQIPALCREGMG
LVISPLIALMDDQVAGLRQLGINAAALHSELEGDEAAKIRSDLANGRIDLLYISPERLLS
SGTLDRLVRIPLSVIAIDEAHCISAWGHEFRPEYRALTALPRHFPHVPRIALTATADERT
REDILAALDMPHAEVLVSSFHRPNLNISVQPKASETRQLITALERHKDAASIVYCGSRAR
TERMATSLRERGWPALAYHAGLSPIEKRAALLRFRSGEPLVIVATIAFGMGIDRPDVRAV
VHLDMPASPEAYYQQIGRAGRDGLPSDTLLLYGGEDMARARYWLDQSAAPESEKRIMRSR
LEAMIALTETTGCRTRALLHCFGEELAEPCGHCDNCLHPVLTFNGTEAARKLLSAVYRTG
QCFGALHVIGVLRGKTTEAITRNGHDKLTVWGIGKDKSEQFWRGVVRQLIARGALRTEGQ
YGGLILNQNVARPILRGEEEVHLRADPVVETNSRLSDRGSQSSGIALTEDSKALFDALRQ
WRREEAQEQEIPPYVIFHDSVLRDIAMEKPSDLDELGDIKGVGRSKLERYGEAVLEVLET
AQA
NT seq 1992 nt   +upstreamnt  +downstreamnt
atggcgtggcgggtgatcatatcgtccagaccccacgcgcaccttccagcagcgaaggca
tgcaggttggctcccgccgcgtggagatcgaactggccaacccctgatagaatgatagaa
accggctccatatccacgccctctcagttttcacatagcaggctggaacgggaccggttt
gctggaaagccgcctcaggaagtcctgcaggcggtttttggctttcccggtttccgcagt
cttcaggcgcaagccgttgaatgcgttatggaaggcagagatacactggtgcttatgcca
accggcggcggcaaaagtgtatgctaccaaatacccgccctgtgccgcgaaggcatgggg
ctggttatttccccccttattgcccttatggatgatcaggttgcgggcctgcgccaactt
ggcatcaatgctgcggccctccactctgaactggaaggggatgaagcagctaaaatccgc
tcagatctggcaaatgggcgcatagatctgctgtatatctctcccgaacgcctgctttca
tccggcacgctggaccggctggtgcgtataccgctttcggttattgccattgatgaagcc
cattgtatttcggcatgggggcatgagttccggccagaataccgcgcgcttacggcattg
ccgcgccattttccgcatgtgccacgcattgcccttactgccacagcagatgaacgcacg
cgggaagatattctggcggcactggatatgccgcatgccgaagtgctggtttccagcttt
catcggcctaatctcaacatttccgtacagcccaaagcgtctgaaacgcgccagcttatt
acagcgctagagcggcataaggatgccgccagtattgtatattgcggcagccgtgctcgg
acggagcgcatggccacttctctgcgtgaacgcgggtggcctgctttggcttaccatgca
gggctttcccctatagaaaaacgtgctgcattgctgcgttttcgttctggtgagcccctt
gttattgtggccacaattgcctttggcatgggcatagacaggccagacgtacgcgccgtt
gtgcatttggatatgccagcctcgcccgaagcctattaccagcaaattggccgggccggg
cgcgatggcctgccgtctgacacactccttctttacggcggggaggacatggcccgcgcc
cgctactggctagatcaatctgccgcaccagaaagcgaaaagcggattatgcgcagccgg
ttggaagccatgatagcgctgaccgaaaccactggctgccgcacccgcgccttactgcat
tgttttggtgaggaactggccgaaccctgtggccattgtgataactgcctacacccggtg
ctgacattcaatggcaccgaagcagcccgtaagctgctttctgccgtgtatcgcacaggg
caatgctttggtgcgctgcatgttatcggtgtattgcgcggcaaaaccacagaagccatt
acgcggaatggacatgacaagctgaccgtatggggcattggcaaggataaaagcgagcaa
ttctggcgcggcgtggtgcgccagcttatagcccgtggcgccttgcgcacagaaggccag
tacggcggcctgattttaaaccagaatgtagcccggcccattttacgtggtgaggaagaa
gttcacttacgggcagaccctgtagtggaaacaaacagccggttatcagatcgtggcagc
caaagctcaggcattgcccttacagaagatagcaaagccctgtttgatgccttgcgccaa
tggcgccgggaagaagcgcaggagcaggagattccgccttacgttatcttccatgattcc
gtgctgcgcgatatcgccatggaaaaaccctcagacctggatgaactgggcgatatcaaa
ggggtagggcgctccaagctggaacggtacggagaagccgtgctggaggttcttgaaaca
gcgcaggcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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