KEGG   Anas platyrhynchos (mallard): 101800945
Entry
101800945         CDS       T02816                                 
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
  KO
K03267  peptide chain release factor subunit 3
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:apla00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101800945 (GSPT1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apla03019]
    101800945 (GSPT1)
   03012 Translation factors [BR:apla03012]
    101800945 (GSPT1)
Messenger RNA biogenesis [BR:apla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     101800945 (GSPT1)
Translation factors [BR:apla03012]
 Eukaryotic type
  Release factors
   101800945 (GSPT1)
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 PAM2 MMR_HSR1
Other DBs
NCBI-GeneID: 101800945
NCBI-ProteinID: XP_038042835
Ensembl: ENSAPLG00000004261
EnsemblRapid: ENSAPLG00030004187
Position
15:7913232..7938938
AA seq 619 aa
MEANGSGSSSDSAPDCWEQADIEPGSAAGPGAAPAGGEAEAQQELLGAAFSRQLNVNAKP
FVPNVHAAEFVPAFLRGGPAPGLPPPSPPPGLPPPPHGAPVETSPEEQTASCEGSNAAAN
MEISESVVENGETEMSPEESWDHKEETSEAELGGGPSVDSGPSEESAQEMMEEEEEIPKP
KSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRET
WYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAV
LVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEK
LVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSEFCPWYIGLPFIPYLDNLPNFNRSADG
PIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDSVAPGE
NLKIRLKGIEEEEILPGFILCDSNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCI
EEVEITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLR
DEGKTIAIGKVLKLVPEKD
NT seq 1860 nt   +upstreamnt  +downstreamnt
atggaggcgaacggcagcggcagcagcagcgactcggctcccgactgctgggagcaggcg
gacatcgagccgggcagcgcagccggcccgggggccgccccggcgggcggggaggccgag
gcccagcaggagctgctgggggcggccttcagccggcagctgaacgtcaacgccaagccc
ttcgtgcccaacgtccacgccgccgagttcgtgccggccttcctcaggggggggccggcg
cccggcctgccgccgccctcgcccccgcccggcctgccgccgccgccccacggtgcaccc
gtagagacttctccggaggagcagacagcctcttgtgaaggttcaaatgctgctgctaac
atggaaatttcagaatctgttgtggaaaatggagagacagaaatgtccccagaagagtca
tgggaccacaaagaagaaacaagtgaagcggaactaggaggtggtccatcggtggattca
gggccttctgaagaaagcgctcaggaaatgatggaagaagaggaggaaataccaaaacct
aaatctgttgtagcgccaccaggtgctcctaaaaaagagcacgtaaatgtagtattcatt
gggcatgtagatgctggcaagtcaaccattggaggacaaataatgtatttgacaggaatg
gttgataaaagaacacttgaaaaatatgaaagagaagctaaagaaaaaaacagagaaaca
tggtacctttcgtgggctttagacacaaaccaagaagaacgagacaaaggtaaaacagta
gaagtgggtcgtgcctattttgaaactgagaagaaacacttcactattctagatgctcct
gggcataagagctttgttccaaatatgattggtggggcttctcaagctgatcttgcagtg
ctggttatttctgcaagaaaaggagagtttgaaactggatttgagaaaggtggacaaaca
agagaacatgccatgctagcaaaaacagcaggtgtaaaacatttaatagttcttattaat
aaaatggatgatccaactgtaaactggagtaatgaaagatatgaggaatgtaaagagaaa
ctggtgccgtttttgaagaaagttggcttcaatcccaaaaaagatattcatttcatgccc
tgctcaggactgactggagcaaaccttaaagaacagtcagaattctgcccttggtatatt
ggactaccatttattccctacctggataatttgccaaacttcaaccgttcagctgatgga
ccaatcaggctgccaattgtggataaatataaggatatgggcactgtggtccttggaaag
ctggaatcaggttctatttgcaaaggacaacagcttgtgatgatgccaaacaagcacaat
gtggaagttcttgggatcctttctgatgatgtagaaactgattcagtagccccaggtgaa
aatctaaagatcagactgaagggaattgaagaggaagagatccttccaggatttattctc
tgtgattccaacaacctgtgtcattctggacgcacgtttgacgcccagatagtgataatt
gagcacaaatccattatctgtccaggttataatgctgtgctgcacatccacacctgtatt
gaagaagttgagataacagccttaatctgcttggtggacaaaaaaacaggagaaaaaagt
aagacacggccacgctttgtgaaacaagatcaagtatgcattgcccgtttaaggacagca
ggaactatctgccttgagacattcaaagatttccctcagatgggtcgctttaccttaaga
gatgagggtaagaccattgcaattggaaaagttctgaaactggttccagagaaggactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (53)   

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