KEGG   Acetobacter pomorum: CPF11_09875
Entry
CPF11_09875       CDS       T05180                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
apom  Acetobacter pomorum
Pathway
apom03030  DNA replication
apom03410  Base excision repair
apom03420  Nucleotide excision repair
apom03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:apom00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CPF11_09875
   03410 Base excision repair
    CPF11_09875
   03420 Nucleotide excision repair
    CPF11_09875
   03440 Homologous recombination
    CPF11_09875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apom03032]
    CPF11_09875
   03400 DNA repair and recombination proteins [BR:apom03400]
    CPF11_09875
Enzymes [BR:apom01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CPF11_09875
DNA replication proteins [BR:apom03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CPF11_09875
DNA repair and recombination proteins [BR:apom03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CPF11_09875
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CPF11_09875
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 DprA_N HHH_2 HHH RNase_H_2
Other DBs
NCBI-ProteinID: ATI12726
Position
complement(2085911..2088715)
AA seq 934 aa
MTETPHLVLVDGSGFIFRAFHALPPMTSPEGVPVNAVYGFTTMLARLLKDHVGTHLAVLF
DASRQTFRSEIYPQYKAHRPEPPEDLRPQFSLIREATQAFNVPGIELPGWEADDLIASYA
TAIRAQGGTCTIVSSDKDLMQLVGDGVCMLDPIKQTPVGPAEVETKFGVPPTKVVDVQAL
MGDPTDNVPGVPGIGPKTAAALVQEYGTLEAVLNAAPEMKKSKRRDMLIEHAEAARVSLQ
LVTLATDVPLPVPVDELNTREPDMLMLADWLDRMGFRSILSRMGLGHPSGAHAHRAAKKV
AAASVAGATTPAADTAPTTDASVLSAPYHDYETVRTAEALQKWISTAQEAGICAVDTETD
GLDPLAANIVGFSIATAPGKACYVPLKHEGTLEAPTGEQLAVDAALKLLAPLLQDDAVLK
IFHNAKFDLLILDHAGIPLSSITAVDDTMLISYSQSAGLHGQGMDELSNLHLNHTPITYD
SVTGTGRNRVPFAQVPVETATKYAAEDADVTLRLWYVLHPTLRTNKALALYEQIERPLSV
ILADMEKAGIAVDRTELDRLSKDFEARMQGMENDIYEAAGRQFNIGSPKQLGEILFDEMG
LKGGKRGKAGAWSTDSSVLQDLADQGHDLPARILAWRQLAKLKSTYTDALLRQAGRDDRV
HTSFQMAITSTGRLSSTDPNLQNIPVRTEEGTRIRQAFIAPSGKKLISADYSQIELRLLA
DVANIPALREAFQLGQDIHARTASEVFNIPLEGMDALTRRRAKAINFGIIYGISAFGLGK
QLGIPAGEARTYIDAYFARYPGIRDYMERMREEARTHGYVLTPFGRRCYVPGIHEKSAAR
RQYAERQAINAPLQGGAADIIKRAMVHLPLALQKAGFGATRMLLQVHDELLFETDESDAE
AVAEIIKNVMEAAADLAVPLVVETGIGQNWAEAH
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgacagaaacaccccatctggttctggtagatggcagcggctttattttccgcgccttt
catgccctcccgcccatgaccagcccagaaggtgtgcccgtaaatgccgtttatggcttt
accaccatgctggctcgtttgcttaaagaccatgtaggcacccatctggctgtgttattt
gatgccagccgccagacattccgttcagaaatttatccgcagtataaagcacaccggccc
gaaccgcctgaagacctgcgcccccagttcagcctgatcagggaggccacacaggccttc
aatgtgccgggcatcgaactgcccggatgggaagcagacgatcttattgcatcctacgca
acagccattcgggcacagggcggtacctgcaccattgtttcttcagacaaagatctcatg
cagttggtgggggatggcgtttgcatgctggacccaatcaagcaaacacctgttggccct
gcagaagtggaaaccaaatttggggtgccccctacaaaagtagtggatgtgcaggccctg
atgggagaccccacagataacgttcccggtgtgcccggtattggccccaaaacagccgca
gcccttgtgcaggaatatggcacactggaagctgttttgaatgccgcgccggaaatgaaa
aaatccaagcggcgtgatatgctgattgaacacgccgaagccgctcgcgtttctctgcaa
ttggtaacacttgctacagatgttcccctccccgtgccggtggatgagctcaacacgcgt
gagccagacatgctaatgctggcagactggctggatcgcatgggctttcgttccatcctc
agccgtatggggcttgggcatccctctggcgcccacgcacatcgtgcagcaaaaaaagtg
gctgcagcatctgttgccggagccactacgcctgctgctgataccgcgccaaccaccgat
gcttctgtactttctgcgccatatcatgactatgaaaccgtacgcacagcagaagctttg
caaaaatggatcagcacagcgcaggaagccggtatctgtgccgttgatacagaaacagat
gggttagacccgctggcggctaatattgttgggttttctattgcaacggctccgggcaaa
gcctgctatgtgccattaaaacatgaaggcactctggaagctcccacgggtgaacaactt
gctgttgatgcggcccttaaacttctggcaccacttttgcaggatgatgccgttttaaag
atcttccataacgccaagtttgatctgctcattctggatcatgcgggcattccgctttcc
agcatcaccgctgttgatgacactatgctaatctcttacagccagtctgccgggttgcat
gggcaaggtatggatgagctttctaacctgcatttaaaccatacgcccattacgtatgac
agtgtgaccggcacaggccgtaaccgcgtgccttttgcgcaagttcctgttgaaacagct
accaaatatgcggctgaagatgccgatgtaaccttgcgcctctggtatgtgctgcacccc
acgctgcgcaccaacaaggcactggcgctttatgaacagattgaacgcccgctttcagtt
attctggccgatatggaaaaagctggcattgctgtagatcgtacagagcttgaccggctt
tccaaagattttgaagctcgtatgcagggcatggaaaacgatatttacgaagccgccggg
cgacagttcaatatcggctcccccaaacaattgggggaaatcctgtttgacgaaatgggc
ctgaagggtggcaaacgcggcaaggccggagcgtggagcacagattcctctgtattgcag
gatctagccgaccaagggcatgatctgcctgcgcgtattttagcatggagacaacttgcc
aagctgaaatccacttatacggatgcgctcttgcgccaagccgggcgggatgaccgcgtg
catacatctttccaaatggctatcacctccaccgggcgcttatcttcgactgatcccaac
ctgcaaaatattccagtgcgaacggaagaaggcacacgcatccggcaggcctttattgcg
ccatctggcaaaaagctaatttctgctgactattcgcaaatcgaactgcggctactggcc
gatgttgccaatattcctgcattgcgtgaagcttttcagctcgggcaggatattcacgcc
cgcacggcatcggaagtgttcaatatcccgcttgagggtatggatgcccttacgcgacgg
cgcgcgaaagccattaattttggcattatttacggcatttcagcctttgggctaggcaaa
cagcttggcattcctgctggtgaagcacgcacttatatagatgcctattttgcccgttac
cccggcattcgtgattacatggaacgcatgcgggaagaagcacgtacccatggctatgtt
ctcacgccttttggccgccgctgctatgtgccgggcattcatgaaaaaagtgctgccaga
cgccaatatgccgagcgacaagctatcaatgctcccttacaaggtggtgctgcagatatt
ataaaacgcgccatggttcatttgccactggctctacaaaaagcaggctttggcgcaaca
cgcatgctcctgcaggtgcatgatgaactgttatttgaaacagatgaatcagacgctgaa
gctgtggcagaaattattaaaaacgttatggaagcagcagcagatcttgctgttccgctg
gttgtagaaaccggaataggccaaaattgggcggaggcacattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (22)   

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