KEGG   Acetobacter pasteurianus IFO 3283-22: APA22_01230
Entry
APA22_01230       CDS       T01815                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
apq  Acetobacter pasteurianus IFO 3283-22
Brite
KEGG Orthology (KO) [BR:apq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:apq03016]
    APA22_01230
Enzymes [BR:apq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     APA22_01230
Transfer RNA biogenesis [BR:apq03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    APA22_01230
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC Trp_repressor
Other DBs
NCBI-ProteinID: BAI07424
Position
132092..133300
AA seq 402 aa
MARSATPEFPPARLISSTQELEAALAPFHNESFVTVDTEFMREQTYWPELCLVQIGATND
VVLIDALADGIDLTPLKNLFVDTAVLKVFHAARQDLEIFLHLFDALPTPLFDTQVAAMVA
GFGDQVGYDSLVGSLTGHMIDKSHRFTDWSVRPLSPAQLTYAAGDVTWLRLVYERLVKKL
EQEQRLDWVAAEMAELEDPATFRPDPEKQWERLRARTNNRRMLAVLRAIAALREREAQRV
NVPRQRLVKDESLLEIAATTPATTEALTRVRGVSRGLAEGRTGQALLQAIKQAQSLPDSE
LPRSPRSKSKDTPRPSASLVALLKVLLTSCCEKHDVAPRLVASADDLDALALDPSQPHAV
LAGWRRKVFGETAQALCEGKIALCVKSGRVVAIPQNTDVASA
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggccagatcagcaacccctgaattccctcccgcgcgtcttatttcctctactcaggag
ttagaggcggctcttgcaccctttcataacgaaagcttcgtaacggttgatacggagttt
atgcgggagcaaacatactggccggaactctgcctggttcagattggcgcgaccaatgat
gtcgtgctgatagatgcgctggcagacggtattgatcttactccgctaaaaaatcttttt
gtggatacggctgtgctcaaggtgtttcacgctgcccggcaggatctggaaatttttctg
cacctgtttgatgccttgccgactcccctttttgatacgcaagttgcagcgatggttgct
gggtttggggatcaggttgggtatgacagcctagttggttccttaaccggacatatgatt
gataaaagccatcgctttacagattggtctgtgcggccattgtctcctgcccaactgaca
tatgctgcgggcgatgtaacgtggttgcggcttgtttatgagcgtcttgttaaaaagctg
gagcaggaacagcgtttggattgggttgcggctgaaatggccgaattggaagaccctgcc
acatttcgcccggacccggaaaaacagtgggaacgtttgcgcgcacgcaccaacaaccgg
cgtatgcttgctgttttgcgtgccattgctgccttacgtgagcgtgaagcccagcgcgtg
aatgttccgcgccaacgactggtgaaagacgaaagcctgctggaaattgcggcaacgact
ccagctacaaccgaagctttaacccgtgtgcgtggtgtttctcgtgggttggcagaaggg
cgtacggggcaggccttgttgcaggctattaaacaggcacagtctttgccggattcggaa
ctaccacgttccccccgcagcaagagcaaagatacaccaaggccttcagcatcgctggtg
gcattgttgaaggtgcttttaacatcttgctgtgaaaagcatgatgttgccccgcgcttg
gtggcatctgcagatgatctggatgccttggcgcttgatccttctcagcctcatgctgtg
ctagctggatggcggcgcaaggtgtttggtgaaacagcacaggctttgtgcgaagggaaa
atagctctttgcgtaaagtctggccgcgttgtggctattccgcagaatacggatgtagct
tctgcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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