KEGG   Auxenochlorella protothecoides: F751_2642
Entry
F751_2642         CDS       T04132                                 
Name
(RefSeq) Ubiquitin-60S ribosomal protein L40-2
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03010  Ribosome
apro04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    F751_2642
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    F751_2642
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:apro03011]
    F751_2642
   04121 Ubiquitin system [BR:apro04121]
    F751_2642
Ribosome [BR:apro03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    F751_2642
  Archaea
    F751_2642
Ubiquitin system [BR:apro04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   F751_2642
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 zf-C4pol Dsc3_N Plexin_RBD Sde2_N_Ubi OTU1_UBXL HATPase_c
Other DBs
NCBI-GeneID: 23614033
NCBI-ProteinID: XP_011399357
UniProt: A0A087SL21
Position
Unknown
AA seq 128 aa
MQIFVKTLTGKTITLEVESNDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLLILARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKLK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctcacgggcaagacaatcacccttgaggtggagtccaat
gacaccattgacaacgtgaaggccaagattcaggataaggagggaatccccccggaccaa
cagcgcctgatctttgcgggcaagcagctggaggatggccgcaccctgtccgactacaac
atccagaaggagtccaccctccacctggtcctgcgcctgcgtggtggaatcatcgagccc
tccctgctcatcctggcccgcaagtacaaccaggacaagatgatctgccgcaagtgctat
gcccgcctgcacccgcgcgcggtcaactgccgcaagaagaagtgcggacacagcaaccag
ctgcgccccaagaagaagctgaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (413)   
   KEGG ORTHOLOGY (1)   
   RefGene (409)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (436)   

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