KEGG   Auxenochlorella protothecoides: F751_3199
Entry
F751_3199         CDS       T04132                                 
Name
(RefSeq) DNA repair helicase UVH6
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03022  Basal transcription factors
apro03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    F751_3199
  09124 Replication and repair
   03420 Nucleotide excision repair
    F751_3199
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:apro03021]
    F751_3199
   03400 DNA repair and recombination proteins [BR:apro03400]
    F751_3199
Enzymes [BR:apro01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     F751_3199
Transcription machinery [BR:apro03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     F751_3199
DNA repair and recombination proteins [BR:apro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     F751_3199
SSDB
Motif
Pfam: DEAD_2 HBB Helicase_C_2 ResIII DEAD AAA_11 nSTAND3
Other DBs
NCBI-GeneID: 23614590
NCBI-ProteinID: XP_011397369
UniProt: A0A087SFH7
Position
Unknown
AA seq 782 aa
MRFLLEGLTVYFPYEYIYPEQYKYMLELKHALDAKGHCLLEMPTGTGKTITLLSLITSYQ
LAHPETGKLIYCTRTVPEMEKVLAEVKDLIEYRSRYFTDAPAPKLLALGLSSRKNLCIHP
RVAEEGSRESVDARCMRLTASWVRERARGAARPGAETTDAGAAAAVPAAVPDIELCEFFE
GLEGAGADGRLDAGVYTMHDLRALGRKRRWCPYFLARHMVAYANVVVWNYQYLLDPKVAA
MVSREMERECIVVFDEAHNIDNVCIEALSVELRQQGLDAAGRNVARLRSEIERVKSTDAD
RLKREYQRLVQGLASQGALRGGGESEQWLANPALPADILQEAVPGNIRRAEHFLAFLQRF
LSFLRTRLNVNQVVSDTPTSFLTHLQSVVAIEGKTLRFCYDRLTSLMKTLEISATDDFGP
IHRVADFATLVGTYTKGFAIIVEPYDERMPGVPDPVIQLACLDASLAIKPVFAKFQSVVI
TSGTLSPIDLYPRILDFKPVCLASLAMTLTRQCLCPVVLTRGGDQLPVSTKFDMRDDPAV
TRNYGRMLLDLAAVVPDGIICFFVSYSYMDSIVSRWNDMGILSALMTHKLVFIETVDVVE
TTLALDNYRRACDCGRGAIFFSVARGKVAEGIDFDRHYGRCVVMFGVPYQYTLGRILRAR
LEYLRETFQIKESDFLAFDAVRQAAQCVGRVIRSKADYGLMVFADKRYQRHDKRDKLPGW
ISSQLRDAHLNLSTDMLLCIAREFMRAMAQPFDGGSAEGASLLSEAAVNALDTAGAGPMV
LG
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgaggttcctcctggagggcctcacggtctatttcccctatgagtacatctatcccgag
cagtacaagtacatgctggagctcaagcatgctctggacgccaagggccactgcctgctg
gagatgccgacggggacaggcaagaccatcaccctgctgtccctcatcacctcgtaccag
ctggcccaccccgagaccggcaagctcatatactgcacgcgcaccgtaccagagatggag
aaggtcctggcggaggtcaaggacctgatcgagtatcgatcccgctacttcaccgacgcc
cccgcccccaagctgctggccctgggcctgtccagtcgcaagaacctgtgcatccacccg
cgcgtggcggaggaggggtctcgagagagtgtggacgcgcggtgcatgcgcctgaccgcc
tcctgggtccgggagcgggcgcgcggcgcagcccgccccggcgcggagaccacggatgcc
ggcgccgccgccgcggtgccggccgcagtgcctgacattgagctctgcgagttcttcgag
ggcctggagggcgcgggcgccgacggccgcctggacgccggggtctacaccatgcacgac
ctgcgcgcgctggggcgcaagcggcgctggtgcccctacttcctggcgcgccacatggtg
gcctacgccaacgtggtggtctggaactatcagtacctgttggaccccaaggtggcagcc
atggtgtcgcgcgagatggagcgcgagtgcatcgtggtcttcgacgaggcccacaacatc
gacaatgtgtgcatcgaggcgctgagcgtggagctgaggcagcagggcctggatgccgcg
gggcgcaacgtggctcgcctccggtccgagattgagcgcgtcaagtccacagacgccgac
cggctcaagcgggagtaccagcgcctggtgcagggccttgcgagccagggggccctcagg
ggcggcggggagagcgagcagtggctcgcgaacccggcgctgccggccgacatcctccag
gaagcggtgccggggaacatccgccgtgccgagcacttcctcgccttcctccagcgcttc
ctctccttcctgcgcacgcggctcaacgtcaaccaggtggtgtccgacacccccacctcc
ttcctcacccacctccagagcgtggttgccattgagggcaagacgctgcgcttctgctac
gaccggctgacaagcctcatgaagacgttggagatctcggccaccgacgactttgggccc
atccatcgcgtggccgactttgccacgctggtgggcacctacaccaagggctttgccatc
atcgtggagccctacgacgagcgcatgcccggggtgccagatccggtgatccagctggcg
tgcctggacgccagcctggccatcaagcctgtgtttgccaagttccagagcgtggtgatc
acctcgggcacgctgtcccccattgacctctacccccgcatcctggacttcaagcccgtg
tgcctggcctcgctggccatgacgttgacgcgccagtgcctctgccccgtggtcctgacg
cgcggtggggaccagctgccggtgtccaccaagtttgacatgcgtgacgacccggctgtc
accaggaactacggcaggatgctgttggacctggcggcggtggttcccgacggcatcatc
tgcttcttcgtctcctactcctacatggactccatagtgtcacgctggaacgacatgggc
atcctgtcggcgctcatgacgcacaagctggtcttcatcgagacagtggacgtggtggag
acgacgctggcgctggacaactaccggcgcgcgtgcgactgcgggcggggcgccatcttc
ttcagtgtggcgaggggcaaggtggcggagggcatagactttgaccggcactacggccgc
tgcgtggtcatgtttggggtgccctaccagtacacgctgggccgcatcctcagggctcgg
ctggaataccttcgcgagaccttccagatcaaggagtcggacttcctggcctttgacgcg
gtgcggcaggcggcgcagtgcgtgggccgcgtcatccgctccaaggccgactacgggctg
atggtgttcgcggacaagcgctaccagcgccacgacaagcgcgacaagttgcctggctgg
atctccagccagctgcgggacgcgcacctcaacctctccaccgacatgctcctgtgcatc
gcgcgggagttcatgcgcgccatggcccagcccttcgacggcgggtcggcggagggtgcc
agcctgctctccgaggcggcggtgaatgctctggacacagcaggggcagggcccatggtc
ctgggatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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