KEGG   Amphimedon queenslandica (sponge): 100639189
Entry
100639189         CDS       T02284                                 
Name
(RefSeq) histone deacetylase complex subunit SAP18-like
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
aqu03013  Nucleocytoplasmic transport
aqu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100639189
   03015 mRNA surveillance pathway
    100639189
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aqu03019]
    100639189
   03036 Chromosome and associated proteins [BR:aqu03036]
    100639189
Messenger RNA biogenesis [BR:aqu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100639189
Chromosome and associated proteins [BR:aqu03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     100639189
SSDB
Motif
Pfam: SAP18
Other DBs
NCBI-GeneID: 100639189
NCBI-ProteinID: XP_003386277
Position
Unknown
AA seq 106 aa
MAASEVHEVKKDAPLEGEEEKKQEVEPYTVDREKTCPFLLRVFCNEGRHHRLDSFMRGNV
PSNELQIYTWMDCTLRELMSLVKEVNPDTRQKGTLFSFATVYPDNR
NT seq 320 nt   +upstreamnt  +downstreamnt
atggcggcctcagaagttcatgaagtcaagaaagacgctcctctagaaggagaagaagaa
aagaaacaggaagtagagccttacactgttgatagggaaaagacttgcccttttttacta
agagtcttttgtaatgaaggaagacatcacagactggatagtttcatgagaggaaatgta
ccttcaaatgaactacagatctacacttggatggattgtacattgagagaactgatgtct
cttgtaaaggaagttaatcctgataccagacaaaagggaacacttttctcctttgctaca
gtgtatcctgataacaggag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (43)   

Download RDF
DBGET integrated database retrieval system