KEGG   Arthrobacter sp. LS16: AFL94_10495
Entry
AFL94_10495       CDS       T04078                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
arl  Arthrobacter sp. LS16
Brite
KEGG Orthology (KO) [BR:arl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:arl03016]
    AFL94_10495
Enzymes [BR:arl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     AFL94_10495
Transfer RNA biogenesis [BR:arl03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AFL94_10495
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: ALD64277
Position
2269636..2270883
AA seq 415 aa
MSNSQPTAPLSASDDSQPSAPPLIPLTAPRDGVPEVIDTPPALRRAVRALRAGTGDLAVD
TERASGFRYGQRAFLIQIRREGAGTWLIDPETLEDLSPLVEFANEQPWILHAATQDLPCL
NELGLAPASLFDTELAGRLAGFPRVSLGTMVAELLGLALAKEHSAADWSTRPLPESWLTY
AALDVEVLEELRQEVTGVLEEQGKLEFARQEFAFELIPPQVAEVAEPWRKLSGIHKIKSK
RNLAVARELWLSRESLAKSRDVAPGRLLPDRAIMAAIEHRANSVPALLQIPGFHGRSVKR
DAPRWLDAVRRGRSTRDLPELRTDKTGLPNPRAWSEKNPKAADRLAAAKLVVTEVSEAWN
IPAENLLTPKFLRELCWTPPAVLSEGSIDEALSALGARPWQRELLAGKLAAAMKA
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgagcaattcccagccgaccgcaccgttatccgcctccgacgactcgcagccttccgcg
ccgccgctgatcccgctcaccgcgccgcgcgatggcgtgcccgaagtcatcgacaccccg
ccggcgctgcgccgcgcggtgcgcgccctgcgcgcgggaaccggagacctggcggtggac
accgaacgcgccagcggcttccgctacggccagcgcgccttcctgatccagatccgccgc
gaaggcgccggcacctggttgatcgatccggaaaccctggaggacctgtccccgctggtc
gagttcgccaacgagcagccatggatcctgcacgccgccacccaggacctgccctgcctg
aacgagctgggcctggccccggcctcgctgttcgacaccgagctggccgggcgcctggcc
ggattcccgcgcgtctcgctgggcaccatggttgccgagctgctgggcctggcgctggcc
aaggagcactccgccgccgactggtccacgcgcccgctgcccgaatcctggctgacctac
gcggcgctggacgtcgaggtgctcgaagagctgcgccaggaggtcaccggcgtgctcgag
gagcagggcaagctggagttcgcccggcaggaattcgccttcgagctgattccgccgcag
gtcgccgaggtggccgagccgtggcgcaagctctcgggcatccacaagatcaagagcaaa
cgcaacctggcagtggcccgcgagctgtggctttcgcgcgaatcgctggccaagagccgc
gatgtcgccccgggcaggctgctgccggaccgcgccatcatggcggcgatcgagcaccgg
gccaactcggtgccggcgctgctgcagatccccggtttccacgggcgcagcgtgaagcgc
gacgccccgcgctggctggatgcggtgcggcgcggccgcagcacccgcgacctgcccgag
ctgcgcactgataagaccgggctgcccaacccgcgcgcctggagcgagaagaacccgaag
gccgcggaccggctggccgccgccaagctggtggtgaccgaggtcagcgaggcctggaac
atccccgccgaaaacctgctgacccccaagttcctgcgcgaactgtgctggactcccccg
gcggtgctcagcgagggctccatcgacgaggccctgagcgcgctgggcgcccgcccgtgg
cagcgcgagctgctggccggcaagctggccgccgcgatgaaggcctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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