KEGG   Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_0496
Entry
RATSFB_0496       CDS       T01624                                 
Symbol
priA
Name
(GenBank) primosome assembly protein PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
asb  Candidatus Arthromitus sp. SFB-rat-Yit
Pathway
asb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:asb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    RATSFB_0496 (priA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asb03400]
    RATSFB_0496 (priA)
Enzymes [BR:asb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RATSFB_0496 (priA)
DNA repair and recombination proteins [BR:asb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     RATSFB_0496 (priA)
SSDB
Motif
Pfam: DEAD PriA_C ResIII PriA_3primeBD Helicase_C PriA_CRR T2SSE AAA_30 PIF1 SLFN-g3_helicase nSTAND3 AAA_19 zf-CHY zinc-ribbons_6 AAA_16 NB-ARC AAA_11
Other DBs
NCBI-ProteinID: BAK81058
UniProt: G2IGY0
Position
585760..587982
AA seq 740 aa
MSGYAKIIIQSISDKLDRFFTYLIPDEMESEISLGNVVKVHFGSNKKLIFGFVFEILCEE
ELSEEDKKYLHKIKSLNSIDKRFCLNRESIELIKYIRNKYLSSYYEAISLFIPSKFLDDI
NLRVKDCLYLDSNVIVPDRFKKDMYIKIMEFVFNNPNLYDKNELSKINNFSKSSISTLIK
HGILKIISKEKSVISSIENLNYIKKYLNDEQKTVYNEIIHGSEKVFLVHGVTGSGKTEVY
LSIFQNFIDRGYDCLILVPEISLTPQMIDRVRERFDNDVVVYHSKLTVTERFTEWQKINN
GKVKVAIGTRSALFLPFKNLGCIVIDEEHEGTYKSDSDPKYLVRDVAVKYSEFKEDLKII
LGSATPSIESYTLAMEGKYKLLNIKNRVNNRSFPTVSVVNMKDELKCGNKSIFSRALYDK
INDRLSKSEQVILFINKRGFSSFVSCRACGYVYKCKYCDITLTYHGNNSHLICHYCGYAQ
AMSNICVECGSNYVKHFGIGTEKVEFITRNIFQKAKVLRMDFDTTRKKNSYSKFYDEIKN
KNVDIIIGTQMIAKGFDFEDVTLVGILAADLSMNVPDYKAYERTFQLLNQVSGRAGRGNK
SGEVCIQTYSPENYVIRHSMNNDYKSFYDEEIKLRKMLNYPPFTDILNVLFQAKHENLYR
EFLVPLYKELKGKFEMKYQILGPSYCMISKINDYYRWQIIFKGDQDEEIYNEIKTLINNR
LSEVKFEYKISFDVNPYSIF
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgagtgggtatgcaaaaataataatacaatctataagcgataagttagatagatttttt
acatatttaataccagatgaaatggaaagtgaaatttctctgggaaatgttgtgaaagta
cattttggatctaataagaaattaatttttggatttgtttttgaaatattgtgtgaggag
gagttatccgaagaggataaaaaatatttacataaaataaagagtttaaattccattgat
aaaagattttgtctgaatcgggaatccatagaacttattaaatatatacgcaataaatat
ttgtcttcgtattatgaggctatatccttatttataccgtcaaagtttttagatgacata
aatttgagagttaaggattgtttatatctggattctaatgtcattgtaccagacagattt
aaaaaagatatgtatattaaaataatggagtttgtatttaataatccaaatctctatgat
aaaaatgaattgagtaaaattaataacttttcaaagagttctatatctactctaataaaa
catggaatattgaaaattatatcaaaggaaaaatccgtaatttcttcgatagagaattta
aattatataaaaaaatatcttaacgatgaacaaaaaacagtttataatgagattatacac
ggaagcgaaaaggtttttttggtacacggtgttactggtagtggtaagacagaggtttat
ttaagtatatttcaaaattttattgatagaggttatgattgtttaatacttgtaccagaa
atttctcttactccacagatgattgatagagtaagggagagatttgataatgatgttgtt
gtatatcatagcaagctaactgttactgagcgttttactgaatggcaaaaaattaataat
ggtaaagttaaggttgctataggaacacgttcggctctttttcttccctttaagaattta
ggttgtattgtaatcgatgaagaacatgagggtacatataaatctgacagtgatccaaag
tatttggttagggatgttgctgttaaatactctgaatttaaagaggatttaaagattata
cttggatcggctacacctagtatagaatcatatactttagccatggaaggtaaatataaa
cttttgaatattaaaaatagagttaataatagaagttttccgactgtttctgttgttaat
atgaaagatgaactcaagtgcggaaataaatctatttttagtagagctttgtatgacaaa
ataaatgataggctttctaaatctgagcaagtaatactgtttatcaataaacgtgggttt
tctagtttcgtttcatgtagagcttgcggatatgtttataaatgtaagtattgtgatata
actttgacatatcatgggaataatagtcatttaatatgccattattgtggatatgcacag
gctatgagtaatatatgcgttgaatgcggaagcaactatgttaaacattttggaattggg
acagaaaaagttgagtttataactagaaatatatttcaaaaggctaaggttcttaggatg
gattttgacactactaggaagaaaaattcatattcaaagttttatgatgagataaaaaat
aagaatgttgatattataattggaactcaaatgattgccaaaggatttgattttgaagat
gtgacacttgttggtattttggcagcagatttgagcatgaatgttcctgactataaagca
tatgaaagaacttttcaacttttgaatcaagtttcgggaagagctggtaggggaaataag
tctggggaggtttgtatacagacatacagtccagaaaattatgttataagacattcgatg
aataatgattataaatcattttatgatgaagaaattaaacttagaaaaatgttaaattat
ccaccgtttacagatatattaaatgtattatttcaggcaaaacatgaaaatttatatcgt
gaatttcttgttcctttgtataaggaactcaagggaaaattcgaaatgaaatatcaaatt
ttaggtccatcttattgtatgatatcaaaaataaatgattattataggtggcagattatt
ttcaaaggagatcaagacgaggaaatttataatgaaataaaaactttaattaataatagg
ttaagtgaagttaaatttgaatataagataagttttgatgtaaatccatattcaatattt
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (27)   

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