KEGG   Candidatus Arthromitus sp. SFB-rat-Yit: RATSFB_1076
Entry
RATSFB_1076       CDS       T01624                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
asb  Candidatus Arthromitus sp. SFB-rat-Yit
Pathway
asb00521  Streptomycin biosynthesis
asb00541  O-Antigen nucleotide sugar biosynthesis
asb01100  Metabolic pathways
asb01110  Biosynthesis of secondary metabolites
asb01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:asb00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    RATSFB_1076 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    RATSFB_1076 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    RATSFB_1076 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    RATSFB_1076 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    RATSFB_1076 (rfbB)
Enzymes [BR:asb01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     RATSFB_1076 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD Polysacc_synt_2 RmlD_sub_bind NAD_binding_4 NAD_binding_10
Other DBs
NCBI-ProteinID: BAK81638
UniProt: G2IER4
Position
complement(1233624..1234616)
AA seq 330 aa
MKICVVGGAGFIGSNFIHYMINKYRDIYVTCIDALTYAGNLENLELVRQNINFKFYRGNI
LDNNFLDKVFQNEDFDIVVNFAAESHVDKSIYNGQVFLETNIIGTKNLMDMCLKYGVNRY
HQISTDEVYGDLKLEDDKSFEEGDILRPSSPYSVSKASADMLVMSYFKMFKLNVTISRCT
NNYGSYQFPEKLIPVVIVNALKGNKIPVYGDGKNIRDWVYVHDHSMAIDKIIKEGKKGEI
YNISSGYEIDNLSLIKKILRLLNKDYSLITYVDDRLGHDLKYSVDSSKIYNELGFKCITD
FEVGIRNTINWYLSNLNWVDLVLKDKYIEN
NT seq 993 nt   +upstreamnt  +downstreamnt
atgaaaatttgtgtagtaggtggagcagggtttataggaagcaattttattcactatatg
attaacaaatatagggatatatatgttacttgtatagatgcattgacatatgcggggaat
cttgaaaacttagagcttgttagacaaaatataaattttaaattttatagagggaatatt
ttagataataattttttggataaagtttttcaaaatgaagatttcgatattgtagtaaat
tttgctgcagaatctcatgtagataaatcaatatataatggacaagtatttttagaaact
aacattataggaactaagaatttgatggatatgtgtttgaagtatggtgttaatagatat
catcaaatttcaactgatgaagtatatggtgatttgaaattagaggatgataaaagtttt
gaagaaggagatatattaagaccatcttcaccttattcagtttcaaaggcatcagcggat
atgttagttatgagttattttaagatgtttaaacttaatgtaacaatatctagatgtaca
aataattatggatcatatcaatttccagaaaagttaatacctgttgttattgtaaatgca
ctcaagggtaataagatacctgtatatggcgatgggaaaaatatacgtgattgggtgtat
gttcatgatcattctatggctattgataagattataaaagaaggcaaaaaaggagaaata
tataatatatcctctggatatgaaattgataatttgagtttgataaagaaaatacttaga
ttgttaaataaagattattctcttataacttatgtagatgatagattagggcatgattta
aaatattcagttgatagtagtaaaatatataatgagcttggatttaagtgtataactgat
tttgaagtaggaattagaaatactataaattggtatttgagtaatttgaactgggtggat
ttggtacttaaggataaatatatagaaaattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (25)   

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