KEGG   Alligator sinensis (Chinese alligator): 102369211
Entry
102369211         CDS       T02922                                 
Symbol
COL5A2
Name
(RefSeq) collagen alpha-2(V) chain isoform X1
  KO
K19721  collagen type V/XI/XXIV/XXVII, alpha
Organism
asn  Alligator sinensis (Chinese alligator)
Pathway
asn04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:asn00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102369211 (COL5A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:asn00536]
    102369211 (COL5A2)
Glycosaminoglycan binding proteins [BR:asn00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   102369211 (COL5A2)
SSDB
Motif
Pfam: Collagen COLFI VWC TILa
Other DBs
NCBI-GeneID: 102369211
NCBI-ProteinID: XP_006024696
UniProt: A0A1U7RVK1
Position
Unknown
AA seq 1501 aa
MMASWMQTRTFLILAALLGQFVTIKAQEDEDYGGEEDGEEVACTQNGLMYLNRDIWKPSP
CQICVCDNGAILCDEIQCQEVLECENPQVPPGECCPVCSHTSRGFDTNVGRGRKGQKGEP
GIVPIVTGIRGRPGPSGPPGSQGPRGERGPKGKPGARGPPGMDGEPGIPGQPGDPGPPGH
PTHPGPDGVSRPFAAQMAGLDEKTGLGSHMGLMPGAVGPVGPRGPQGLQGKQGGSGPTGP
PGEPGEPGPMGPVGSRGPEGPPGKPGEDGESGRPGQGGEVGFPGSPGTRGFPGAPGLPGL
KGHRGHKGLDGPKGETGALGAKGESGPTGAMGATGPLGPRGMPGERGRLGPQGTPGGRGT
HGMPGKPGPMGPLGLSGSPGFPGIPGMKGDAGPTGPRGPEGPQGQRGETGPQGPQGSSGL
PGTEGTDGSLGAKGPTGSPGTSGPPGLSGPPGSPGPQGSTGPPGIRGQAGDPGVPGFKGE
AGPKGEPGPQGSQGPIGPLGEEGKRGPRGDPGSVGPPGPVGERGAPGNRGFPGSDGLPGP
KGAQGERGPAGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGR
PGPAGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGP
PGLAGERGEQGPPGPTGFQGLPGTPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGE
RGEPGAPGLQGEKGMAGGHGPDGPKGNPGPTGTPGDPGPPGLQGMPGERGIAGTPGPKGD
RGGMGEKGAEGTAGNDGARGLPGPLGPMGPAGPTGEKGESGPRGLVGPPGSRGNPGSRGE
NGPTGAVGFAGPPGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPPGPSGVPGLKGG
RGTQGPPGATGFPGSAGRVGPPGPTGAPGLAGPIGEPGKEGPPGLRGDPGSHGRVGDRGP
AGPPGGPGDKGDAGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGK
QGPTGPPGDKGPPGPIGQSGATGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGEPGPSGL
PGAQGAPGTPGPVGPQGEAGQRGEVGSRGPMGPPGRAGKRGLPGPQGPRGDKGDNGDRGD
RGQKGHRGFTGLQGLPGPPGPIGEQGSAGIPGPFGPRGPPGPVGPSGKDGNSGPLGPIGP
PGVRGTVGEAGPEGPPGDPGPPGPPGPPGHLTAAIGDIMGHYDDSMADPLPEFTEDEAAP
DDSNKTDPGVHATLKSLSSQIETMRSPDGSKKHPARTCDDLKLCHPSKKSGEYWIDPNQG
CVEDAIKVICNMETGETCISANPSSIPRKTWWTSRSADLKPIWYGLDMNRGSQFVYGDSE
SPNTAIIQMTFLRLLSKEASQNITYHCKNSIGYMDDQSKNLKKAVILKGSNDLEIKAEGN
NRFRYTVLQDSCSKHNGNVGKTVFEYRTQNVARLPIIDIAPVDIGSTDQEFGIEIGPVCF
V
NT seq 4506 nt   +upstreamnt  +downstreamnt
atgatggcaagctggatgcaaacaagaacttttttaatccttgctgctttattagggcaa
tttgtaacaataaaagcacaagaagatgaagattatgggggtgaagaagatggtgaagaa
gtagcctgtactcagaatggtctgatgtatctgaacagggatatttggaagccctcacca
tgccagatttgtgtttgtgacaatggagccattctttgtgatgagatccagtgtcaagaa
gtgctcgaatgcgagaaccctcaggtgccaccaggcgaatgctgccctgtgtgttcccat
acatcacgtggtttcgatactaatgttggtagaggaaggaagggacaaaaaggagaacct
ggaatagtgccaattgttacaggtatacgaggccgcccaggaccatcggggcctccaggc
tcacaaggaccaagaggagaacgaggaccaaaaggaaaacctggtgcccgtggtcctcca
gggatggatggggaacctggtatccctggacagcctggtgatcctggtcccccaggacat
ccaacccacccaggaccagatggagtaagtaggccatttgcagctcagatggcaggtttg
gatgaaaaaactggacttggtagtcatatgggactcatgcccggtgcagtgggtccagtg
ggtccaagaggtcctcagggtctacaaggaaaacaaggtggttctggcccaacaggtcca
ccaggtgaacctggagaacctggaccaatgggtccagttggttctcgtggcccagaagga
cctccaggcaaacctggtgaagatggtgagtctggtagaccaggacaaggtggtgaggtt
ggatttccaggatctccagggacacgaggctttcctggtgctccaggtcttccaggtctc
aagggccacaggggccacaaaggactagatggtcctaaaggtgagactggagcactggga
gccaagggtgaatctggtcctacgggtgccatgggtgcaactggacctctaggccctaga
ggaatgccaggagaaagagggcgactcggaccacaagggactccgggtggacgtggtaca
catggcatgcctggaaagcctggaccaatgggtcctcttggtctatctggttctcctggt
tttccaggcattcctggtatgaagggtgacgcaggtccaacaggtccacgtggtccagaa
ggcccacaggggcaacgaggtgaaacagggccacaaggtccacaaggatcatcaggtctt
cctgggactgaaggaacggatggttctcttggtgctaaaggcccaacaggatctccaggc
acctctggcccacctggcttatcaggtccacctggctctccaggacctcaaggcagtact
ggtcctccaggaatccgaggccaagccggagaccctggtgtgccaggtttcaaaggagaa
gcgggtcctaaaggtgaacctggtccacaaggttctcagggtcctattggaccattaggt
gaagaagggaaaagaggccctcgtggtgatccagggtcagtaggtccaccaggtcctgtt
ggagaaaggggtgctcctggtaaccgtggtttcccaggttctgatggcttgcctggacca
aagggagctcagggggagcgtggtccagcaggttcttctggtcctaaaggaggccaggga
gatcctgggcgtccaggtgaacctggcctcccaggtgctaggggtctcacaggaaatcca
ggtgttcaaggtcctgaaggaaaacttggtcctttgggtgcaccaggagaagatggacgt
ccaggcccagcaggatcaataggtattcggggtcagccaggcagcatgggtcttccagga
ccaaaaggcagcagtggtgatcctggaaaacctggagaagcaggcaatgctggtgtccca
gggcagagaggtgctcctggtaaagacggtgaagttggcccttctggtcctgttggtcca
cctggcttagcaggggaaagaggagaacaaggtcctccaggccctacaggctttcagggt
ttgcctgggacaccaggtcctccaggggaaggaggaaaaccaggagatcagggtgttcct
ggagatcctggagctgtaggcccattaggtccaagaggtgaacgtggcaatccaggggag
agaggagaaccaggtgcaccaggacttcaaggtgaaaagggtatggctggaggtcatggt
cctgatggtccaaagggcaatccaggccctactgggaccccaggtgatccaggccctcct
ggtcttcagggtatgcctggagaaagaggtattgctggaactccaggccccaagggtgac
aggggtggcatgggggagaaaggtgctgaaggtacagcaggaaacgatggtgcaaggggt
cttccaggtccattaggtccaatgggtcctgcaggtcccactggtgaaaagggtgaatct
ggtccacgaggtttagttggtcctcctggctcccgtggaaatccgggttcccgtggtgaa
aatggcccaactggtgctgttggttttgctggtcctccgggccctgatggtcagccaggt
gtgaaaggggaacctggagaacctggacagaaaggggatgctggatctccaggaccacaa
ggccttgctgggtctcctggcccaccaggtccttctggtgttcctggtctaaaaggtggt
cgtggcactcagggtccaccaggtgcgacaggatttcctggatctgctggaagagtcgga
cctccagggcctactggagctccagggcttgctgggcctattggtgagccaggaaaggaa
ggccctccaggtcttcgtggtgatcctggttctcatggccgagtaggagatcgtggacca
gctgggccaccaggtggtcctggagacaaaggagatgcaggagaagatgggcaacctggt
cctgatggtcccccaggtccagctggaaccactggtcagagaggtattgttggcatgcca
ggtcagcgaggtgagagaggcatgcctggcctgcctggacctgctggcacaccaggaaaa
caaggtccaacaggcccaccaggagataaaggtcctccagggcctattggccaatcaggt
gccactggtccagtaggtgaacctggtccagaaggacctgctgggaatgatggcactcct
ggacgagatggagctgttggagaacgtggtgatcgtggtgagccaggaccttcaggttta
ccaggtgctcagggtgctccaggtaccccaggaccagttggaccacaaggagaagcaggg
cagaggggtgaagtaggttctcggggtccaatgggtccacctggccgtgctggaaaacgg
ggcttgcctggtccccaagggcctcgtggtgacaaaggtgataatggagaccgaggtgac
agaggccagaagggacacagaggtttcactggtcttcagggtcttcctggtccacctggt
ccaattggtgaacagggcagtgctgggattccaggtccttttggacctagaggccctcca
ggtccagttggtccttcaggcaaagatggaaactctggaccccttgggccaattggacct
cctggcgtaagaggaactgttggagaagcgggacctgaaggtcctccaggtgatcctggt
cctccaggtcctccaggccctccaggtcatctcacagctgccattggtgacattatgggc
cattatgatgacagtatggcagatccactgccggagttcactgaagatgaagcagcccct
gatgacagcaataagacagatccaggagtccatgccacattgaagtcacttagtagccaa
attgaaactatgcgcagtcccgatggctccaagaaacacccagcacgcacatgtgatgat
ctaaaactctgtcacccatcaaagaaaagcggtgaatattggattgaccctaaccagggt
tgtgttgaagatgccattaaagtaatttgcaacatggaaactggggagacttgtatttct
gcaaacccatccagtataccacgcaaaacatggtggacaagtaggtcagctgaccttaag
cctatatggtatggtcttgacatgaacaggggttcacagtttgtctatggagatagtgaa
tcacccaatactgctattatccaaatgaccttcctgcgtctcctatcaaaggaggcttct
cagaatatcacctaccattgtaaaaacagcattgggtacatggatgaccagtctaagaac
ctcaaaaaagctgtaattcttaaggggtcgaatgacctggagatcaaagcagaaggaaac
aaccgatttagatatactgttcttcaggacagctgttctaaacataatgggaatgtgggc
aaaactgtctttgaatacagaacacagaatgtggcacgtttacctatcatagatattgcc
cctgtggatattggaagtactgaccaggaatttggaattgagattgggccagtttgcttt
gtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (58)   
   KEGG ORTHOLOGY (1)   
   RefGene (54)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (71)   

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