KEGG T04213: AWN88

Agrobacterium tumefaciens S33: AWN88_13835

Entry

AWN88_13835       CDS       T04213

Name

(GenBank) ATP-dependent DNA helicase RecG

K03655

ATP-dependent DNA helicase RecG [EC:5.6.2.4]

Organism

ata Agrobacterium tumefaciens S33

Pathway

ata03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:ata00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AWN88_13835
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ata03400]
    AWN88_13835
Enzymes [BR:ata01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AWN88_13835
DNA repair and recombination proteins [BR:ata03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     AWN88_13835

SSDB

Motif

Pfam:

DEAD Helicase_C RecG_dom3_C ResIII tRNA_anti-codon RecG_wedge SNF2-rel_dom AAA_30 SecA_DEAD AAA_16 SLFN-g3_helicase AAA_22

Other DBs

NCBI-ProteinID:

AMD59353

Position

linear:546989..549094

AA seq 701 aa
MRPAILDPLFASVSTLAGVGPKLADLLAKLLGRENADDTRVIDLLFHAPSNVIDRRNRPG
IALAAPGAIVTIQGRVDRHQPPPPGNRSAPYRVFLHDETGELALTFFRAKGDWLSKALPV
DEEVLVSGKVDWFNGRASMVHPDFMVKLSEAENLPLVEAVYPMTAGLSAKVLRKAIEGGL
SKLPVFPEWIDETLKTRQGFGDVASSFRELHDPRDSADIEPQAPARLRLAYDEFLAGQLS
LALVRQRLRKVAGQPIRAKGDIAAKILAQLPFSLTASQSAAVKDILTDMAGEDRMLRLLQ
GDVGAGKTLVALMAMATVVEAGGQAVLMAPTEILARQHYATISKLAQAVGLTVEVLTGRT
KGKERREIEERVASGEAQIVIGTHALFQDSVTYKNLVLAVVDEQHRFGVHQRLRLTAKGI
TPHMLVMTATPIPRTLVLAAFGDMDVSKLTEKPAGRKPIQTVTIPTERIGDIVERLRAAL
KDGKKAYWICPLVEETEESDLMSAEERHAVLSQMLGANIGLIHGRMSGPEKDAAMLAFKN
GETRLLVATTVVEVGVDVPDATIMVIEHAERFGLAQLHQLRGRVGRGDEASTCILLYKGP
LSENGRARLSILRDSEDGFLIAEEDLKLRGEGELLGTRQSGTPGFRIASLEAHADLLEIA
RKDAAYVIERDPELIGPRGDALRTLLYLHRRDEAIRFLHAG

NT seq 2106 nt +upstreamnt +downstreamnt
atgcgcccggccattctcgatccgctgtttgcctccgtctccacgcttgccggcgtgggg
ccgaagcttgccgatctcctggcaaaacttctgggacgggagaatgcggacgatacgcgc
gttatcgaccttttgttccatgcgccctccaacgtcatcgaccgccgcaaccgtcccggc
atcgcgcttgcagcacccggcgccattgtcaccattcagggacgtgtcgaccgccatcag
ccgccaccgccgggtaaccgctccgcgccctatcgcgtcttcctgcatgacgaaaccggc
gaactggcgctgaccttctttcgcgccaagggcgactggctgtcaaaggccctgcccgtc
gatgaagaggttctcgtcagcggcaaggtggactggttcaacggtcgagcctccatggtg
cacccggatttcatggtgaagctttccgaggcggaaaatctgccccttgtggaagccgtc
tatcccatgaccgccggcctttccgccaaggtgttgcgcaaggcgatcgaaggcgggctc
tcgaagctgccggtcttcccggaatggatcgatgagacgctcaagacccggcagggcttc
ggtgacgtggcatccagcttccgcgagctccacgacccgcgcgacagtgccgatatcgaa
ccgcaagccccggcgcgcctacggctcgcctacgacgaattcctcgccggacagctgtca
ctggcgctggtgcgccagcggctccgcaaggtggcgggccagccgatccgcgccaagggc
gatatcgccgccaaaatcctcgcgcaactgcccttctcgctgacggcaagccagagcgca
gccgtcaaggatatcctgaccgacatggccggcgaagaccgcatgttgcggctgttgcag
ggcgatgtgggggccggcaagacgctggtggcgctgatggccatggcgacggtggtggag
gccggcggacaggcggtgctgatggcgccgaccgaaattctcgcccgtcagcattacgcc
accatttccaaactcgcccaggccgtgggcctcacggtggaagtgctgaccggccgcacc
aagggcaaggagcgccgcgagatcgaggagcgcgtggcctcgggcgaagcgcagatcgtc
atcggcacccatgcgctgtttcaggacagcgtcacctataagaaccttgtgctggccgtg
gtggatgaacaacaccgtttcggcgtgcatcagcgcctgcgcctcactgccaagggcatc
acgccgcatatgcttgtcatgaccgccacgcccattccacgcacgctggtactggccgcc
ttcggggacatggatgtctccaagctcaccgaaaaaccggcgggccgcaaacccatccag
acggtgacgatccccaccgaacgcatcggcgatattgtcgagcggctgcgcgcagcgctg
aaggacggcaaaaaagcctactggatttgcccgctggtggaggagacggaggagtccgac
ctgatgtcggcggaggagcgccacgccgttctctcgcagatgctcggcgccaacatcggc
ctcattcacgggcgtatgagcggcccggagaaggacgccgccatgctcgccttcaagaac
ggcgaaacccgcctgctggtggcaactacggtggtcgaagtcggcgtcgatgtgcctgac
gcgacgatcatggtcatcgaacacgccgaacgtttcggcctcgcccagctgcaccagctt
cgcggccgcgtcggacgcggcgacgaggcctccacctgtatcctgctctacaagggcccg
ctcagcgaaaacggccgcgcacggctctccatcctgcgcgacagcgaggacggcttcctg
atcgccgaggaagatttgaagctgcgcggcgaaggcgaattgctcggcacgcgtcaatca
ggcacgcctggcttccgcatcgccagcctcgaggctcatgccgacctcctggaaatcgcc
cgcaaggacgccgcctatgtcatcgagcgcgacccggaactgataggtccacgcggcgat
gcgctacgcaccttgctctatctgcaccgccgcgacgaagcgattcgtttcctgcacgcc
ggctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (21)   

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