KEGG   Agrobacterium tumefaciens Ach5: Ach5_50090
Entry
Ach5_50090        CDS       T03816                                 
Name
(GenBank) RNA polymerase subunit sigma-24
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
atf  Agrobacterium tumefaciens Ach5
Brite
KEGG Orthology (KO) [BR:atf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atf03021]
    Ach5_50090
Transcription machinery [BR:atf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Ach5_50090
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 MarR_2 Sigma70_ECF
Other DBs
NCBI-ProteinID: AKC10772
UniProt: A0AA86G286
Position
pAt:complement(420774..421316)
AA seq 180 aa
MLAIAAGRQHALAELVERHGKGLTAFARRYLGGSREDAEDIVQEVFWTVWRKATDFDPDR
AQVTTWLYRIAANRCIDVGRRNALLRFVGLDAMPADPAFDEPDAEATIFGRSELALARKG
ILGLPQRQRMALLLRAVADLDVAEIAQVMGTTGGSVEQLLVRARRALREHMEKAGGGPRV
NT seq 543 nt   +upstreamnt  +downstreamnt
atgctggcgatcgcggcggggcgtcagcacgcgctcgcagaactcgtcgagcgccacggc
aagggcctgacggcctttgctcggcgttacctgggcggctcgcgtgaggatgccgaggat
atcgttcaggaggtattctggaccgtatggcgcaaggccaccgatttcgatccagacagg
gcacaggtgacgacctggctgtacaggatcgccgcgaaccgctgtatcgatgttggacgg
cgaaacgcgctgctgcgcttcgtcgggctggatgcgatgcccgccgacccggcctttgac
gagcccgacgccgaggcgacaatcttcggacggtcggaactggccttggcccgcaaaggc
atcctcggcttgccgcagcgccagcgcatggcgctgctcctgcgcgcggtcgccgatctc
gacgttgcggaaatcgcacaggtgatgggaacgaccggcggctcggtcgagcagcttctg
gtccgcgcgcggcgcgcgttgcgggagcatatggaaaaagcaggcggaggcccaagagta
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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