KEGG   Arabidopsis thaliana (thale cress): AT1G18485
Entry
AT1G18485         CDS       T00041                                 
Name
(RefSeq) Pentatricopeptide repeat (PPR) superfamily protein
Organism
ath  Arabidopsis thaliana (thale cress)
SSDB
Motif
Pfam: PPR PPR_2 DYW_deaminase PPR_1 E_motif PPR_3 PPR_long
Other DBs
NCBI-GeneID: 838429
NCBI-ProteinID: NP_564054
TAIR: AT1G18485
UniProt: Q0WN60
Position
1:6363042..6366263
AA seq 970 aa
MASVLLPLPQVFVLFDYRRSRKESSFPRAVYNSNSISSNSTNANHFLRRISNFCETGDLD
KSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDD
VLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMIST
TDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTD
ALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLP
VCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS
WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY
SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS
LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL
YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM
MPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE
KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRY
LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIH
QNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSW
IELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLR
GHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFK
NGVCSCGDYW
NT seq 2913 nt   +upstreamnt  +downstreamnt
atggcttctgttttgcttccattgccacaagtatttgttttgtttgattatcgcaggagc
cgtaaagagtcaagctttccccgcgccgtctacaattccaattccatttcttctaattca
accaatgccaatcatttccttcgccggatttctaacttctgtgaaaccggagacctcgac
aagtcctttcgaactgtccaagaattcgttggcgatgacgagagctcgtccgatgcgttt
cttcttgtccgagaagctcttgggcttctcttacaagcttctgggaagagaaaagacatt
gaaatgggaagaaagatccaccagctggtttctgggtcgacccggttaaggaatgatgac
gttctctgtactcgtattatcaccatgtacgctatgtgtggctctcctgatgattctcgg
tttgtgtttgatgccttgcggagtaagaatctcttccagtggaatgctgttatcagctct
tactcaagaaacgagctttacgatgaagtattagagacgtttatcgagatgatctcaacg
actgatcttttaccggatcatttcacttatccatgtgtgattaaggcttgtgctgggatg
tctgatgttgggatcgggcttgcggttcatgggttggtggtgaagaccggattggtggaa
gatgtttttgtgggtaatgcattggtgtctttctatggaactcatggttttgttactgat
gccttgcaactgttcgatataatgcctgagagaaatttggtttcctggaactccatgatt
cgagtgttctcggataatggtttctcagaagaaagcttcttgcttcttggagaaatgatg
gaggaaaatggtgatggtgcgtttatgccggatgttgctacacttgttactgtgttgccg
gtttgtgcaagagaaagagaaatagggttgggaaaaggtgttcatgggtgggcggtgaaa
ttgaggttggacaaggaactagtccttaacaatgccttaatggacatgtactccaaatgc
ggttgcattactaatgcacaaatgatctttaagatgaacaataacaagaatgtggtttct
tggaacacaatggtaggaggtttttcagcagagggtgatacacatgggacgtttgatgtt
ctgagacagatgctggcaggaggcgaagatgtcaaagcggacgaggtaaccattctaaat
gcagtgcctgtttgtttccatgaatcattcttaccgagtttaaaggaacttcattgttac
tccttaaaacaagagtttgtatacaatgagttagtagccaatgcctttgtggcttcttat
gcaaagtgtggctcactgagttatgcccagcgtgtgtttcatggtataaggagtaaaaca
gtgaactcttggaatgctttgattggcggccatgctcagagcaatgatccgagattgtcc
ttggatgctcatttgcagatgaaaatttctggattgctacctgatagttttactgtctgt
agtcttctttcagcttgttctaaactaaaatccctgcggttgggaaaggaagtgcatggg
tttataatccgaaattggttagaaagagatttgtttgtttatttatcagtactctcatta
tacattcattgtggggagctatgcactgtacaagcattatttgatgcaatggaagataaa
agcttagtatcttggaatactgtaatcaccggttaccttcagaatggatttcctgataga
gctttgggcgtctttagacaaatggttttgtatggaatccagctttgtgggatttctatg
atgcctgtgtttggtgcgtgttcgctgctaccttctcttcgactggggagagaagcgcat
gcttatgctttgaagcacctcctggaggacgatgcgtttattgcatgttctttaattgat
atgtatgccaagaatggttctataacacaatcatctaaggttttcaatggcttgaaggag
aaaagcacggcatcttggaatgccatgataatgggatatggaatacatggcctagcaaaa
gaggctataaaactctttgaagagatgcaaagaacaggtcataaccctgatgacctaact
ttcttaggtgttctaacggcttgcaaccatagtggtctgatccatgaagggctgagatat
ctggatcaaatgaagtcttcttttgggctaaagccaaatttaaagcattatgcttgtgtc
attgacatgttaggccgagctgggcaactagacaaggctctaagggttgttgcagaagag
atgtctgaggaagctgacgttggaatttggaagtctctgctcagctcatgcagaatccat
caaaatctggaaatgggagagaaagttgctgctaagttattcgaattagaaccagaaaag
cctgagaattatgttctgctttccaacttatatgcaggattggggaaatgggaagacgtg
agaaaagtgagacagagaatgaacgagatgagtttacgaaaggatgctggatgctcttgg
atcgaactaaacaggaaggtatttagctttgttgtcggtgaaagattcttagatggtttt
gaggaaatcaaaagtctttggagtatattggagatgaagatatcgaagatgggatacaga
ccagacacaatgtcagtacaacatgatctaagtgaagaggagaagattgaacagttaagg
ggacacagcgagaagcttgcccttacctacgggttgattaaaacttcagaaggaacaact
attagagtttacaagaacctaaggatctgtgtggactgtcacaatgcagcaaagttgatc
tccaaggtcatggaaagggaaatagttgtgagggacaacaaaaggtttcatcatttcaag
aatggggtttgttcttgtggagattactggtaa

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Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (32)   

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