KEGG   Arabidopsis thaliana (thale cress): AT1G25360
Entry
AT1G25360         CDS       T00041                                 
Name
(RefSeq) Pentatricopeptide repeat (PPR) superfamily protein
Organism
ath  Arabidopsis thaliana (thale cress)
SSDB
Motif
Pfam: PPR_2 PPR PPR_1 DYW_deaminase PPR_3 E_motif TPR_14 PPR_long TPR_19 TPR_10 Eplus_motif DUF5717_N
Other DBs
NCBI-GeneID: 839121
NCBI-ProteinID: NP_173907
TAIR: AT1G25360
UniProt: Q9FRI5 A0A178W7R7
Position
1:8894380..8897124
AA seq 790 aa
MQPNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYC
KSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMI
TGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGA
GYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEE
LLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAG
LLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSG
YVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAF
SGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC
LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKY
FDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHG
NMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWI
EMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLT
THSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFR
NGECSCGNFW
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgcaaccgaatccagaccttgtccgagccatcgccaaccgctacgccgcgaatctccgc
ctctgtttgccgctccgacgaacatctctgcagctcgcgcgagccgtccatggaaatatc
attactttcgggtttcagccacgtgcccatatcctgaaccgtttgattgatgtttattgt
aaatcgtcagagctaaattatgcacgccaactgttcgatgaaatctctgaaccagataaa
attgctagaaccaccatggtctctggctattgtgcttccggtgatatcaccctcgctcga
ggggtttttgagaaagctcctgtgtgtatgcgtgatactgtaatgtacaatgcgatgatc
actggcttttcacataacaatgatggttactctgctattaacctcttttgtaagatgaag
catgaaggattcaaacctgacaacttcactttcgcaagtgttctcgcgggtttagcgtta
gttgccgatgacgagaagcaatgtgtgcaatttcatgccgcagctctgaaatctggtgct
ggttatattacttcggtttctaacgctctggtgtctgtgtattcgaaatgtgcgtcttct
ccgtctctgctacattcagctagaaaagtgtttgatgagattcttgagaaagatgagagg
tcgtggacgactatgatgacgggttatgtaaagaatggttattttgatttaggggaagag
ttgcttgaggggatggacgacaatatgaagctggttgcttataatgctatgatttctggt
tatgttaatcgtggtttttatcaggaggcattggagatggtaagaaggatggtttcatct
ggaattgagctcgatgagtttacatatcctagcgttattagggcgtgtgccacagctgga
ttgcttcagttgggaaagcaagttcatgcttatgtattaagaagggaggatttctcgttt
cattttgacaattcgttagtttcgttatactacaaatgcggtaagtttgatgaggcgaga
gccatttttgagaaaatgccggcaaaagacttggtttcctggaatgcgttgttgtcaggg
tatgttagttctgggcacataggtgaggcgaagttgattttcaaagagatgaaagagaag
aatattctatcatggatgataatgatatccgggttagctgaaaatgggtttggagaagaa
ggtttgaagctgttttcttgtatgaagagagaaggtttcgagccttgtgattacgctttt
tccggggcaatcaaatcatgtgccgtgctgggagcatattgcaatgggcaacagtaccat
gcacagttgcttaaaatagggtttgactctagcctctctgctggaaacgctctgattaca
atgtatgcgaaatgcggggttgtggaggaagctcgacaggtgtttcgaactatgccttgt
ctggattcggtttcctggaatgcgttgattgctgcattgggacagcatggccatggtgct
gaagcagtagatgtgtatgaggagatgctaaagaaagggataagaccggatcggattacg
ttgcttacagttttgacagcatgtagccacgcgggtttagtggaccagggacggaaatat
tttgattctatggagactgtttaccgtatacctccaggtgcagatcattacgcaaggctg
atcgatttgctttgtcgttctgggaaattctctgatgcggaaagtgtaatcgaatcatta
cctttcaaacctactgcagaaatctgggaagctcttctttctggttgcagagtgcatgga
aacatggaactagggatcatcgctgcagacaaactcttcggtctcataccagaacatgat
gggacatacatgctcttatcaaacatgcacgcagctactggccagtgggaggaagtggca
agggtacgtaaactaatgcgggatcgaggtgtaaaaaaagaagtagcttgtagttggatt
gaaatggagacacaagtgcatacatttctagttgatgatacatcacatccagaagcagaa
gctgtttacatctatcttcaagacctgggtaaagagatgaggagactcgggtatgtacca
gacacgagcttcgtgttgcacgacgtagagtctgatggtcacaaggaagatatgttgaca
actcatagtgagaagattgcggttgcttttgggctaatgaaacttcctccgggaacaact
attaggattttcaagaacttgaggacttgtggagattgccataacttcttcaggttcttg
tcgtgggtggtgcagcgagacattatcttgagagacaggaagaggtttcatcatttccgg
aatggcgagtgttcttgtggtaacttctggtag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (43)   

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