KEGG   Arabidopsis thaliana (thale cress): AT1G52500
Entry
AT1G52500         CDS       T00041                                 
Symbol
MMH-1
Name
(RefSeq) MUTM homolog-1
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AT1G52500 (MMH-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ath03400]
    AT1G52500 (MMH-1)
Enzymes [BR:ath01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     AT1G52500 (MMH-1)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AT1G52500 (MMH-1)
DNA repair and recombination proteins [BR:ath03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AT1G52500 (MMH-1)
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco Fpg-like_C NFACT_N TFIIF_alpha Ribosomal_S13
Other DBs
NCBI-GeneID: 841681
NCBI-ProteinID: NP_564608
TAIR: AT1G52500
UniProt: O80358
Structure
Position
1:19559880..19563113
AA seq 390 aa
MPELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGK
NLWLELDSPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKDSEEWPSKYSKFFVELDDGLEL
SFTDKRRFAKVRLLANPTSVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGY
ISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDADSSQFPSYW
IFHNREKKPGKAFVDGKKIDFITAGGRTTAYVPELQKLYGKDAEKAAKVRPAKRGVKPKE
DDGDGEEDEQETEKEDESAKSKKGQKPRGGRGKKPASKTKTEESDDDGDDSEAEEEVVKP
KGRGTKPAIKRKSEEKATSQAGKKPKGRKS
NT seq 1173 nt   +upstreamnt  +downstreamnt
atgccggagcttccagaggtcgaggcggcgaggagagcaatagaagaaaattgtcttgga
aaaaagattaagcgagtcattatcgccgacgacaacaaagtgatccatggaatctcgccg
tccgatttccagacctcaatcctcggaaaaaccatcatctctgctcgtagaaagggcaaa
aacctctggctcgaattagattccccgccatttccttcttttcaattcggtatggctggt
gctatttatatcaaaggcgttgcagttactaagtataagaggtctgctgtaaaggactca
gaggagtggccatctaagtattcaaagttcttcgtcgagcttgatgatggtctggagctt
tcatttactgataagaggagatttgccaaagttcgacttctagcaaatcctacttctgtg
agtccaatatcagagcttggtcctgatgcattgttggagcctatgacagttgatgaattt
gcagaaagcttagctaaaaagaaaataaccataaaacctctcctacttgatcagggatat
atttcaggtattgggaattggatcgctgatgaagtgctgtaccaagccagaatccacccg
ttgcagactgcttctagcctctccaaagagcaatgtgaagctttgcacacatccatcaaa
gaggtgatagaaaaagctgtggaagttgatgcagacagtagtcagtttcctagttactgg
atttttcataatagggaaaagaagccaggaaaggcctttgttgatgggaagaagattgat
ttcattactgctggtggaaggacaacagcttatgttccagaactgcagaaactttatggg
aaagacgcagagaaagcagccaaggttagaccggctaaacgaggtgtgaaacccaaagaa
gacgatggagatggggaagaagatgaacaagaaactgagaaagaagatgagagtgctaaa
tcgaagaaaggacagaaacccagaggtggtcgtggtaagaagcctgcatcgaagacaaaa
acagaagagagcgacgatgatggagatgatagcgaggctgaagaagaagttgtgaaaccc
aaaggccgtggtacaaagcctgcaataaagaggaagtctgaagagaaagctactagccaa
gctggtaagaagccaaaaggaagaaaaagttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
3D Structure (3)   
   PDB (3)   
Protein domain (6)   
   Pfam (6)   
All databases (54)   

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