KEGG   Arabidopsis thaliana (thale cress): AT1G71300
Entry
AT1G71300         CDS       T00041                                 
Name
(RefSeq) Vps52 / Sac2 family
  KO
K20298  vacuolar protein sorting-associated protein 52
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT1G71300
Membrane trafficking [BR:ath04131]
 Protein recycling
  Others
   EARP complex
    AT1G71300
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    AT1G71300
SSDB
Motif
Pfam: Vps52_C Vps52_CC Sec3_CC SPG48
Other DBs
NCBI-GeneID: 843471
NCBI-ProteinID: NP_001320711
TAIR: AT1G71300
UniProt: Q9FVV6
Position
1:26874064..26878319
AA seq 701 aa
MDDFSNLEKHESELGAFFGDLAFEEDSRSEDISLEGLQQELEECESDEVVANILSSGDKL
REYAKGVENNLRKVELDSVEVAILLPDYIKESDKLVSLHDQIRDCNCILSQMETLLSGFQ
EEIGSISSDIKILQENSMDMGLRLKNRRVTESKLAKFVEDFIVPPKMIHVIVDGEVNEEY
IKTLGILSKKLKFVETDQAVKSSKALKDVEPELEKLRQKAISKVYDFIVQKLIALRKPKT
NIQILQQSVFLKYKYIISFLKEHGKEVFMDVRAAYIDTMNKVLSAHFQSYIQAFEKLQLD
IATSNDLIGVDTRSTGLFSRSKEPLKNRCAVFALGERIQIIKEIDQPALIPHIAEASSLK
YPYEVLFRSLHKLLMDTATSEYIFCEDFFGEQSIFYEIFAGPFSVIYEHLDSVLSSCYDA
IGLLLMIRIIHHHQLIMSRRRIPCLDSYLDKVNISLWPRFKTVFDLHIGSLRNANINTIW
EDDVHPHYIMRRYAEFTASFIHLNVEYGDGQLDINLERLRMAVDSLILKLAKLFPRPKQQ
MVFLINNYDMTIAVLKEAEPEGGKIQMHFEELLKSNTSLFAEELLVEHFSDMIKFVKSRA
NEDSSPNLERSITVAEVEPLVKDFGSRWKTAIELMHKDIITCFSNFLCGMDILIAGMTQL
LLYYTRLEDCIKKIDGGSALNRDIVNYQSIMFEIKKYKKTF
NT seq 2106 nt   +upstreamnt  +downstreamnt
atggacgacttcagtaatcttgagaaacatgaatctgaattaggagcattctttggagac
ttggcttttgaagaggattcaagaagtgaggatatatcattggaagggcttcaacaagaa
cttgaagaatgtgaaagtgacgaggttgttgccaatatactgtccagtggtgacaaactt
agagaatatgccaaaggtgttgaaaacaatctacggaaggttgaattggattcagttgag
gttgctattctcttacctgattacataaaagaaagtgataaactagtctcacttcacgat
cagattcgtgactgtaactgcatcttgtcacaaatggaaactcttctcagtggatttcag
gaagagattggttctataagttcagacataaagattcttcaagaaaattcaatggacatg
ggtttgagactgaaaaatcgaagggtgactgaatcaaagctagcaaaatttgtcgaagac
tttatagtaccaccaaagatgattcatgtaattgttgatggagaggtgaatgaagagtat
atcaaaacacttggaattctgagcaagaagctgaaatttgtagaaacagatcaagcagtt
aaaagttccaaagcattaaaagatgtagagcctgagcttgaaaagctccggcaaaaagct
atttccaaggtttatgattttattgttcagaagcttatagccctgaggaaacccaaaaca
aacattcagattcttcaacagagtgtgtttttaaagtacaagtatattatctccttcctc
aaagaacatggaaaagaagtgtttatggatgtccgcgctgcatacatagataccatgaac
aaggtgctaagtgcacattttcagtcttatattcaagcatttgagaaactacagttagat
atagccacatcaaacgacttgattggtgtggacactagaagcactggcctcttctcaaga
tctaaggagccactaaagaaccgttgtgccgtttttgctttgggtgagaggatacaaatt
ataaaggaaattgatcaacctgctttgatcccgcacatagccgaagccagctctctcaag
tatccttatgaagtgctcttcaggagcttgcacaagctacttatggatacagctacttct
gagtatatcttttgtgaagatttctttggtgaacagtctatattttatgaaatatttgcg
ggcccattctctgttatctatgagcacttggattccgtcctctcaagctgttatgatgct
atcggtttgctgcttatgattcgcattatacaccaccaccagcttatcatgtctcgccgg
aggattccatgcctggattcatatctggacaaggttaatatttctttgtggcctcgtttt
aagacggtgtttgacttgcacatcggcagtctgcgaaatgcaaacataaatacaatatgg
gaagatgatgtgcatcctcactatatcatgagacgttatgctgaattcacggcttcgttt
attcacctgaatgttgaatatggagatgggcagcttgatataaatttggagcgtttaaga
atggcagtagacagcttgattcttaagcttgcaaagttgttcccaaggccaaagcaacag
atggtgtttctcattaacaactatgatatgaccattgctgtgctgaaggaagctgaacca
gagggtgggaaaattcaaatgcattttgaggaattactaaagagcaacacttccttattt
gcggaagaattgctggtggagcatttcagtgatatgatcaaatttgttaaaagccgagcc
aatgaggattcaagtccaaatttagagaggtccatcacagttgctgaagtagagccgctg
gtgaaggactttggaagcagatggaagacagcgatagaattgatgcacaaagatatcata
acttgctttagtaacttcttgtgtggtatggatattttgatagctggaatgacacaactt
ttgctttattacacaagactcgaagactgtatcaagaagatagatggtggatctgctctc
aacagggatattgtcaactatcaatcaatcatgttcgagatcaagaaatacaaaaagact
ttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (51)   
   KEGG ORTHOLOGY (1)   
   RefGene (45)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (64)   

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