KEGG   Arabidopsis thaliana (thale cress): AT1G73720
Entry
AT1G73720         CDS       T00041                                 
Symbol
SMU1
Name
(RefSeq) transducin family protein / WD-40 repeat family protein
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ath03041]
    AT1G73720 (SMU1)
Spliceosome [BR:ath03041]
 Complex B
  Other components
   Complex B specific factors
    AT1G73720 (SMU1)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 LisH_TPL NBCH_WD40 Ge1_WD40 Nup160 RMC1_N PQQ_3 Nucleoporin_N zf_topless WD40_like
Other DBs
NCBI-GeneID: 843707
NCBI-ProteinID: NP_177513
TAIR: AT1G73720
UniProt: Q8W117 A0A178WHG8
Position
1:27724991..27730031
AA seq 511 aa
MALEIEARDVIKIMLQFCKENSLNQTFQTLQSECQVSLNTVDSVETFISDINSGRWDSVL
PQVSQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQAERYLRMEHL
LVRSYFDPHEAYGDSTKERKRAQIAQAVAAEVTVVPPSRLMALIGQALKWQQHQGLLPPG
TQFDLFRGTAAMKQDVEDTHPNVLTHTIKFGKKSHAECARFSPDGQFLASSSVDGFIEVW
DYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRR
FDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGS
RIITASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNSIHLFPKNTEHIVVCNKTSSI
YIMTLQGQVVKSFSSGNREGGDFVAACVSTKGDWIYCIGEDKKLYCFNYQSGGLEHFMMV
HEKDVIGITHHPHRNLLATYSEDCTMKLWKP
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggcgctcgaaatcgaagctcgagatgtaataaagattatgcttcagttctgcaaagaa
aattccttgaatcagacattccagacattacaaagcgagtgtcaggtttccttgaataca
gtagacagcgtcgagacgtttatttctgatattaatagtggaagatgggactcggtacta
cctcaagtttcccagcttaaacttcccaggaataaacttgaagacctttatgaacagatt
gtattggagatgatagaacttcgagagttggacactgcccgagctattttgagacaaact
caggtgatgggtgtcatgaagcaggagcaagcagaaagatatttgcggatggagcatctt
ctagtcagaagctattttgatccgcatgaggcttatggagactcaactaaagaaagaaaa
cgggcacagattgctcaagctgtggctgccgaggttaccgtggtaccaccttcacggtta
atggctttgataggtcaggctttaaagtggcaacaacatcaaggcctgctccctccagga
acacagtttgacctctttcgtgggacggcagctatgaagcaagatgtagaagacacacat
cctaatgttcttactcataccataaagtttggtaaaaagagtcatgcagaatgcgctaga
ttctcaccagatggacagtttcttgcatcttcttctgtggatggttttatcgaggtatgg
gattacataagtggaaagctcaagaaggatttgcaatatcaagctgatgaatctttcatg
atgcatgatgatcctgtcctctgcatagactttagcagagattcagagatgcttgcatct
gggtcacaagatggaaagattaaaatctggcgtataaggactggtgtatgcatacgtcgt
tttgatgcacattcccaaggagttacaagtctttccttctctcgggatggaagccaatta
ctgagtacctcctttgaccaaactgcaagaatccatggtttgaaatctgggaaattgttg
aaagaatttcgtggtcacacatcttatgtaaatcatgccatctttacaagtgatggaagc
cgtattatcactgcctccagtgattgtacagtaaaggtctgggattctaagacgacagat
tgtctacaaacattcaagccgccacctccgttaaggggaactgatgcatcagtcaactct
attcacttgttccccaaaaacacagaacacattgttgtgtgcaacaagacatcatctata
tacattatgacactccaaggacaggttgtgaagagtttctcatccggtaatagggaagga
ggagattttgtagcagcatgtgtatctacaaaaggagattggatatactgcatcggcgaa
gacaagaaactgtactgcttcaactatcaatctggtggacttgagcatttcatgatggtg
catgagaaggatgtgattggtataacacaccacccgcatagaaacctccttgctacctat
agtgaagattgcactatgaagttatggaagccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (42)   

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