KEGG   Arabidopsis thaliana (thale cress): AT2G43960
Entry
AT2G43960         CDS       T00041                                 
Name
(RefSeq) SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
  KO
K12825  splicing factor 3A subunit 1
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AT2G43960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ath03041]
    AT2G43960
Spliceosome [BR:ath03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    AT2G43960
 Complex B
    AT2G43960
 Complex C
   U2 SnRNP specific factors
    AT2G43960
SSDB
Motif
Pfam: Surp
Other DBs
NCBI-GeneID: 819001
NCBI-ProteinID: NP_181924
TAIR: AT2G43960
UniProt: Q58FX2
Position
2:complement(18203312..18204912)
AA seq 442 aa
MEKTKNKTPPPRPDDDELRSIMLERLSIAAARGGLEMEEKLKSRFVGLDIPSCSFVFPKG
RDHHIYKQKIAEYTKSPPLHSPPPLPPGLVDQCCLKYNPLEQVAIIDELSAFTVRVPEGG
MTRKELGIIKFTAQFVLRYGQYFRLALRDRVSTDTEFKFLDKGDSRAHFFSLLFLGYSHL
LRAWEYPLVGMDVLVDGFLSALNSFKEKLEGDEELVDKIKTDRHDFVVCDEYFADLENKA
LELKLKTMARMHHPLNKHDSQGTLRVPPVLVLFRVGIPQGGMMRKELGLMKFTAMFVVRY
GNDFWDALWDRVSSTETEFQFLKRNPGNDRGMLLFSQLLLAFGNVVQPWGLCPRESNPPA
RMEAVLEGFFTAFSAFKKKQEDEEDEVVNKLVTDRRDFVVSETFQYFLDIEESTPLPERL
PLRQTGSMFARRHPMVQQPPLL
NT seq 1329 nt   +upstreamnt  +downstreamnt
atggagaaaacaaagaataaaactccaccaccacgtccagatgatgatgagctgagaagt
attatgttggagagactttcaattgccgctgccagaggcgggttggagatggaggagaag
ctgaagtccagatttgttggccttgatattccatcatgcagctttgtgttccctaaaggt
cgtgatcaccatatttacaagcaaaaaattgctgagtacaccaagtctcctcctcttcat
tctcctcctcctctcccaccgggcctagttgatcaatgctgtttaaagtataaccctctg
gagcaagttgctattatcgacgaactgtctgcgtttacagttagagtccctgaaggaggc
atgacgcgcaaggaacttggtatcattaagttcacagcccaatttgtgttgcggtatggg
caatattttcggttggctctacgggatagagtgtctactgatactgagttcaagtttctg
gataagggagattcaagggctcactttttctctcttctttttcttgggtatagtcatcta
ttaagggcttgggaatatcctctggttggtatggatgttcttgttgacggttttctcagt
gctttgaattctttcaaggaaaagctagagggtgatgaggagctagtggacaagattaag
actgataggcatgattttgttgtttgtgatgaatattttgctgacctcgagaacaaagcc
cttgaactcaaactcaaaacaatggctaggatgcatcatcctctgaataaacacgattct
cagggtacactcagggtgccacctgtccttgtcttgtttagagttggaatccctcaagga
ggcatgatgcgcaaggagcttggtttaatgaagttcacagccatgtttgtggtgcgttat
gggaatgatttttgggatgctctgtgggatagagtgtctagtactgaaacagagtttcag
tttctgaagaggaatcctggaaatgatagaggaatgcttcttttctctcagcttcttctt
gcttttggtaatgtagtacaaccttggggactgtgcccgagagagagtaacccgcccgct
cgtatggaagctgttctcgaggggtttttcactgcttttagtgctttcaagaaaaagcaa
gaggatgaggaggacgaggtagtgaacaagcttgtgactgataggcgtgattttgtggtt
agtgagacttttcagtattttcttgacatagaggagtctactcctctacctgaaaggctt
ccgctgcgtcaaacaggatctatgtttgctcgtcgacatccaatggtgcaacaaccacct
cttctatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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