KEGG   Arabidopsis thaliana (thale cress): AT3G10230
Entry
AT3G10230         CDS       T00041                                 
Symbol
LYC
Name
(RefSeq) lycopene cyclase
  KO
K06443  lycopene beta-cyclase [EC:5.5.1.19]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath00906  Carotenoid biosynthesis
ath01100  Metabolic pathways
ath01110  Biosynthesis of secondary metabolites
Module
ath_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:ath00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00906 Carotenoid biosynthesis
    AT3G10230 (LYC)
Enzymes [BR:ath01000]
 5. Isomerases
  5.5  Intramolecular lyases
   5.5.1  Intramolecular lyases (only sub-subclass identified to date)
    5.5.1.19  lycopene beta-cyclase
     AT3G10230 (LYC)
SSDB
Motif
Pfam: Lycopene_cycl DAO Pyr_redox_2 Thi4 NAD_binding_9 FAD_oxidored Pyr_redox Pyr_redox_3 HI0933_like NAD_binding_8 Trp_halogenase GIDA FAD_binding_3 FAD_binding_2 XdhC_C
Other DBs
NCBI-GeneID: 820185
NCBI-ProteinID: NP_187634
TAIR: AT3G10230
UniProt: Q38933 A0A178VBX7
Position
3:complement(3164075..3166038)
AA seq 501 aa
MDTLLKTPNKLDFFIPQFHGFERLCSNNPYHSRVRLGVKKRAIKIVSSVVSGSAALLDLV
PETKKENLDFELPLYDTSKSQVVDLAIVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLIWP
NNYGVWVDEFEAMDLLDCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKMLQKCIT
NGVKFHQSKVTNVVHEEANSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNPGYQVAY
GIVAEVDGHPFDVDKMVFMDWRDKHLDSYPELKERNSKIPTFLYAMPFSSNRIFLEETSL
VARPGLRMEDIQERMAARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVGIGGTAGMV
HPSTGYMVARTLAAAPIVANAIVRYLGSPSSNSLRGDQLSAEVWRDLWPIERRRQREFFC
FGMDILLKLDLDATRRFFDAFFDLQPHYWHGFLSSRLFLPELLVFGLSLFSHASNTSRLE
IMTKGTVPLAKMINNLVQDRD
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggatactctgttgaaaacacccaacaagctcgattttttcatccctcagtttcatggg
tttgagagattatgcagtaacaatccataccattcaagggttaggcttggtgtgaagaaa
agggctatcaaaattgtctctagtgtagtgagtggtagcgctgctcttttggatcttgtt
cctgaaactaagaaggagaatcttgactttgagcttcctttgtacgacacttccaagagt
caagttgttgatttggctattgttggtggtggtcctgctggtttagccgtggctcagcag
gtttctgaagctggactctctgtttgttccattgatccttctcctaagctcatatggcct
aacaattatggagtttgggttgatgagtttgaggctatggatttactagactgcctggat
accacatggtctggtgctgttgtctatgtcgatgaaggtgtcaagaaggatttgagccgg
ccttatgggagagttaaccggaaacagctcaaatccaaaatgcttcagaaatgtattacc
aacggtgttaaatttcatcagtctaaggtcactaatgtggttcacgaggaggcaaactcc
actgtggtctgcagtgacggtgtaaagattcaggcttccgtggttcttgatgccactggg
ttttcccgatgcttggttcagtatgacaaaccttacaaccctgggtaccaagtagcttac
gggattgtagctgaagttgatggtcacccattcgatgtagacaaaatggtgttcatggat
tggagagacaaacatctggactcatatcctgagctgaaagaacggaacagcaagatccca
acgttcttgtacgctatgccattttcttccaaccgaatatttcttgaagaaacttcttta
gttgctagacctggtctgagaatggaagatatccaagaaagaatggctgctagactgaaa
catctggggatcaatgtgaagaggattgaggaagacgagcgttgtgtgatcccgatgggc
ggtcctttaccagtcttacctcaacgggttgtggggattggtgggacagcaggaatggtt
catccttcaactggttacatggttgctaggactcttgcagctgcaccaatagttgcaaat
gccattgtgagatacctcggttcaccaagtagtaatagcctgagaggagatcaactctct
gctgaggtttggagagacttgtggcctatcgaacggcgtagacagagggagttcttctgt
tttggaatggatattctgctgaaactcgatttagacgctactagaaggttctttgatgca
ttctttgatctgcaacctcattactggcacggattcttgtcttccaggctgtttctcccg
gaactgttggtcttcgggttgtcgctcttctcacacgcttccaatacctcaagattggag
atcatgacaaaggggactgttcctcttgctaagatgatcaacaatttggtacaagataga
gactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-EPD (1)   
   OC (1)   
   PGDBJ (1)   
   TAIR (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (15)   
   Pfam (15)   
All databases (55)   

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